Rhodobiaceae bacterium SMS8: RHODOSMS8_03706
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Entry
RHODOSMS8_03706 CDS
T05596
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD13
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rbs
Rhodobiaceae bacterium SMS8
Pathway
rbs00061
Fatty acid biosynthesis
rbs00071
Fatty acid degradation
rbs01100
Metabolic pathways
rbs01212
Fatty acid metabolism
rbs02024
Quorum sensing
Module
rbs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RHODOSMS8_03706
00071 Fatty acid degradation
RHODOSMS8_03706
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHODOSMS8_03706
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbs01004
]
RHODOSMS8_03706
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbs04147
]
RHODOSMS8_03706
Enzymes [BR:
rbs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RHODOSMS8_03706
Lipid biosynthesis proteins [BR:
rbs01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RHODOSMS8_03706
Exosome [BR:
rbs04147
]
Exosomal proteins
Exosomal proteins of breast milk
RHODOSMS8_03706
Exosomal proteins of breast cancer cells
RHODOSMS8_03706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AWZ03204
UniProt:
A0A2Z4UQ15
LinkDB
All DBs
Position
3778724..3780253
Genome browser
AA seq
509 aa
AA seq
DB search
MLGTVISGDRRIGGAALEERVKKAASGFLSLGLREGDRVAILMRNDIAFLEATFACGELG
LYPVPVNWHFSADETAYVLNDSGAKALVIHADLLPALKGSVPDNVQCVVVATPPEVQDAY
RLSADACQVPDGERNWDGWLDEQVPCAGDAKAAPASMIYTSGTTGHPKGVRRLPPKEDQT
AATLEARKYVFDFQPNMRAVMTGPLYHSAPNLYSTFSVRIGGTLFLQPRFDAEETLALIE
REKLTHAHLVPTMFVRLLRLPAEVHTKYDLSSLVRVMHGAAPCAEAVKRQMIDWWGPVIH
EYYGGTETGAAVHCSSEEWLAHPGTVGKAIPGATVKVLNDEGKELPAGEVGEIFLRLWSF
PDFTYHNKDEARGECEREGLITCGDVGCLDEDGFLYLRDRKRDMVISGGVNIYPVEIEHE
LIQMPGVQDCAVFGIPNEEFGESLAAAIQLMDGSTLSAEDVTSWLAPRIAKYKLPHVVTF
HDVLPREETGKIFKRKLRDPYWKDAGRAI
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctcggaaccgtgatcagcggtgaccgccgcattggcggagctgcactcgaagaacgc
gttaaaaaggcggccagtgggtttctgtctctggggttgagggaaggggatcgcgtggcg
atcctcatgcgaaacgacatcgcatttctggaagcgaccttcgcttgcggtgaactgggt
ctctatcctgtcccggtcaattggcatttttctgccgatgaaacggcttatgtgctgaac
gattcaggcgcgaaggcgctggtcatccatgctgatctgctcccggcccttaaaggcagt
gtgccagacaatgtccaatgtgtcgtcgtcgcaacgccaccggaagtgcaagacgcctat
cgcttgtcagctgacgcgtgccaggtgccagacggggagcggaactgggacgggtggctt
gatgagcaggtaccttgtgctggcgacgccaaggcggcaccggccagcatgatctatacg
tcgggcaccaccggccatccgaagggcgtacggcgcctgccaccaaaggaagaccagacg
gcggcgacccttgaagcccggaaatatgtgttcgatttccagccaaacatgcgtgcggtg
atgacgggtccgctctatcactctgcacccaatctctattcaaccttttcggttcgcatc
gggggaacgctctttcttcagccacgttttgatgccgaagaaacacttgcgctgattgag
cgtgaaaaactcacccatgcccatttggtgccgactatgtttgtgcggctcctgcgtttg
ccagcagaagtgcacaccaaatatgacctaagctcgctcgttcgggtgatgcatggcgca
gccccgtgtgctgaagccgtgaagagacagatgatcgactggtggggcccggtgatccat
gaatattacggcggcaccgagacgggcgcagcggtgcattgttcgtcagaagaatggctg
gcgcatccgggaaccgtgggcaaagccattcccggcgccacggtgaaagtcctgaacgat
gaaggcaaggaactgcctgcaggcgaagtcggtgagatctttctccgtctctggtccttt
cccgatttcacttatcacaacaaggatgaagcgcgtggcgaatgcgagcgcgagggtctc
atcacctgcggcgatgtcggctgccttgatgaagacgggttcctttacctgcgggaccgc
aagcgagacatggtgatttcaggtggcgtcaatatttatccggtcgagatcgagcatgag
ctcatacagatgcccggtgtgcaggactgcgccgtgtttggcattcccaacgaagaattt
ggggaaagccttgccgcagccattcaactgatggacggttcaacattgagtgcggaagac
gtgaccagctggcttgcgccccgcatcgcgaagtacaagctcccccatgtcgtcacgttc
cacgatgtcctaccaagagaagagaccggcaagatctttaaacgcaaactccgcgatcct
tattggaaggatgcgggcagggctatctaa
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