Rhizobium brockwellii: RLCC275e_16350
Help
Entry
RLCC275e_16350 CDS
T09359
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rbw
Rhizobium brockwellii
Pathway
rbw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RLCC275e_16350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbw03019
]
RLCC275e_16350
Enzymes [BR:
rbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RLCC275e_16350
Messenger RNA biogenesis [BR:
rbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RLCC275e_16350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
HEM4
Flavi_DEAD
AAA_22
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
QJX07975
UniProt:
A0A6M5ZQS7
LinkDB
All DBs
Position
3251911..3253632
Genome browser
AA seq
573 aa
AA seq
DB search
MVRSGDSHCGAPKGYTLTNFESLGVSKPIVATLFQLGIETPTPIQEHAIPLLLEGRDLIG
LAQTGTGKTAAFGLPLIEKLLADERRPDNRTTRTLILAPTRELVNQIAESLKKFIRKSSL
RINVVVGGVSINKQQLQLEKGTDILVATPGRLLDLINRRAITLTAVRYLVLDEADQMLDL
GFVHDLRKIAKMVPKKRQTMLFSATMPKAIADLAGEYLVDPVKVEVTPPGKAADKVEQYV
HFVAGKNDKTELLRKSLTENPDGRAMVFLRTKHGAEKLMKHLENIGYSVASIHGNKSQGQ
RERALKAFRDGSIKTLIATDVAARGIDIPAVSHVYNYDLPEVPDAYVHRIGRTARAGRDG
IAIAFCAPDEAKLLRDIERLMGIDITVASGEAPANISGGPRRANGNNRNRNGGQGREGQG
RGEGRGDQNRSEHRGNRQERRPRREGEGSEVRAGGEERRPRPERPTSRNEDFRGQRRGET
TPDLGPDNDLASTSDFRASAKPQRPAHHGAHANGEPSGHHRGNSRHAHGRPARKHGEDRG
PQQAQAGEPRRDGNGGNHRGGSRNGGGQRRERA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttccggcgatagtcattgtggcgccccgaaaggttataccttgactaatttt
gaatcgcttggtgtctccaagccgatcgtcgctactttgttccagctcggcatcgaaacg
ccgacgccgatccaggaacatgccattcctctcctcctcgaaggccgcgacctgatcggc
cttgcccagaccggcaccggcaagacggccgccttcggcctgccgctcatcgaaaagctg
cttgccgacgaacggcgccccgacaaccgcacgacgcgcacgctgatccttgcgccgacc
cgcgaactggtgaaccagatcgccgagagccttaagaagttcatccgcaagtcgtcgctg
cgcatcaatgtcgtcgtcggcggcgtttcgatcaacaagcagcagcttcagcttgaaaag
ggcaccgacattctcgtcgccacgcccggccgcctgctcgacctcatcaatcgccgcgcg
atcaccctgactgcggttcgctatctcgtgctcgacgaagccgaccagatgctcgacctc
ggcttcgtccacgatctgcgcaagatcgccaagatggtgccgaaaaagcgccagaccatg
ctgttctcggcgaccatgccgaaggcgatcgccgatctcgccggcgaatatctcgtcgat
cccgtcaaggtcgaagtcacgcctccaggtaaggctgccgacaaggtcgagcagtacgtt
catttcgtcgccggcaagaacgacaagacggagctgctccgcaagtcgctgaccgaaaac
cccgatggccgcgccatggtcttcctgcgcaccaagcacggtgccgagaagctgatgaag
catctcgaaaacatcggctattccgtcgcctcgatccacggcaacaagagccagggtcag
cgcgagcgggcgctgaaggccttccgcgacggcagcatcaagacgctgatcgccaccgac
gtcgccgcccgcggcatcgacattccggccgtcagccacgtctacaactacgacctgcct
gaagtgcctgacgcctatgtgcatcgcatcggccgcacggcgcgtgccggccgcgacggc
atcgccatcgctttctgcgcacccgacgaagccaagctgctgcgtgatatcgagcgcctg
atgggcatcgacatcactgtcgcaagcggcgaagcgccggcaaacatcagcggcggcccc
cgtcgcgccaacggcaacaaccgcaatcgcaatggcggccagggtcgcgaaggtcagggt
cgtggcgaaggccgtggcgaccagaatcgctccgagcatcgcggcaaccgtcaggaacgc
cgcccgcgccgcgaaggtgaaggcagcgaagtccgcgccggcggcgaggagcgtcgtccg
cgtccggagcgcccgaccagccgcaacgaggatttccgcggtcagcgccgcggtgaaacg
accccggatctcggccccgacaacgatctggcctcgacctccgatttccgcgcctcggca
aagccgcagcgtccggcccatcacggcgcccatgccaacggtgagccgagcggtcatcac
cgcggcaacagccgccatgcccacggccgcccggcccgcaagcacggcgaggaccgcggc
ccgcagcaggcccaggccggcgaaccacgccgcgacggcaacggcggcaaccaccgaggt
ggctcccgcaacggcggcggccagcgccgcgaacgcgcctga
DBGET
integrated database retrieval system
