Roseiflexus castenholzii: Rcas_1128
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Entry
Rcas_1128 CDS
T00585
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rca03016
]
Rcas_1128
Enzymes [BR:
rca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rcas_1128
Transfer RNA biogenesis [BR:
rca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rcas_1128
Prokaryotic type
Rcas_1128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
PseudoU_synth_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABU57227
UniProt:
A7NIC7
LinkDB
All DBs
Position
complement(1462594..1463487)
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AA seq
297 aa
AA seq
DB search
MHGFLNIDKPSGMTSHDVVVRIRRLSGQRRVGHAGTLDPAATGVLVVALGGATRLIEYVQ
HQTLKRYLAAVCLGATTTTDDANGEVVVQQALPPLDRAMIEEALAPLRGTIWQTPPMYAA
LHHQGRRLYALARAGVTVEPPPRQVYIERLELVEYQPPLLTLDVVCGSGTYIRALARDLG
VALGCGAHLAALRRTAVGAFRVEDAISLHVLEEEVHADAHEALRRRLLPPEIAVADWHAL
RLDEEQARRIRHGLAIPAPADAPSQTRAHAPDGTLLALLRYDGSHWRPIKVFDWTDA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcatggttttctcaacatcgacaagccatccggcatgacctcgcatgatgtcgtggtg
cgtatccggcggttgagcgggcagcggcgcgtcgggcacgccggaacgctcgatccggcg
gcgaccggggtgctggtcgtggcgcttggcggggcaacgcggctgattgagtatgttcag
catcagacgctcaaacgctatctggcggcggtgtgtttgggtgcgacaacgacaactgat
gatgcaaacggtgaagtggtcgtgcagcaagcgctgcctccgctcgaccgagccatgatc
gaggaggcgctcgcgccgttgcgtgggacgatctggcagactccgccgatgtatgcggcg
ctgcaccatcagggtcgccgtctgtatgcgctggcgcgcgcgggtgtgacggttgaaccg
ccgccacgccaggtgtatatcgagcggctcgaactggttgagtaccaacctccgctgttg
acgctcgatgtggtgtgcggcagcggtacgtacattcgcgcactggcgcgtgatctgggg
gtggcgctgggatgcggtgcgcatctcgcagcgctccggcgcacggcggtgggcgccttt
cgtgtcgaagacgcaatatcgctccatgtgctggaagaggaggtgcatgccgacgcgcac
gaggcgctgcgtcggcggctcttgccgccagagattgcggttgcagactggcatgccctg
cgcctcgatgaagagcaggcccgccggatccggcacggtctcgcgattcctgctccggct
gatgcgccatcacagacgcgcgcgcatgctcccgatggcacattgctggcgctgctgcgg
tatgatggcagtcactggcgcccgataaaagtattcgattggactgatgcatga
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