Riemerella columbina: NYR17_03125
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Entry
NYR17_03125 CDS
T09247
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rcl
Riemerella columbina
Brite
KEGG Orthology (KO) [BR:
rcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcl03009
]
NYR17_03125
Enzymes [BR:
rcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NYR17_03125
Ribosome biogenesis [BR:
rcl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NYR17_03125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
AbiJ_NTD5
ThiS-like
Motif
Other DBs
NCBI-ProteinID:
WKS95746
LinkDB
All DBs
Position
652152..653210
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AA seq
352 aa
AA seq
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MAEDYNDFETEAPWTDDQNEEDGGLYEHLNLVVDKKQEPLRIDKYLLIFRQNSSRNKISQ
TCRAGNVVVNGVPVKQNYRVKPGDHISVLLTHPPRENVIIPQDIPLNIVYEDDDVLVVDK
EAGMVVHPGFGNWDGTLVNALAYHFEKNGLKTDLDRVGLVHRIDKDTSGLLVIAKNEYAM
SFLAKQFFERTTKRLYWAFVWGNLQEDEGTIRGHIGRHLKNRMQMAVFEDGSHGKHAVTH
YKVLERFKYMTWVECKLETGRTHQIRAHFKHIGHTLFNDERYEGHQILRGINLPKYKQFV
RNVFEVLPRHALHAHTLGFVHPTTKKELYFESPMPQDMQQAVDKWRTYLGRD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagattataacgattttgagaccgaagcgccgtggacagatgaccaaaacgaa
gaagatggcggtttgtacgagcatctcaacttggtggtggataaaaaacaagaaccgcta
aggatagataaatatctcctcatttttaggcaaaactcttctcggaataaaatttcgcaa
acctgtagagcgggcaatgtggtggttaatggcgttcccgtaaaacaaaattatagagta
aaaccaggggatcatatttcggtgttgctgacccatccgccgagagaaaatgtgattatc
ccacaagatattccgctgaatatcgtttatgaagatgatgatgttctggtggtggataaa
gaagctggaatggtggtgcaccctgggtttggcaattgggatggcactttggtgaatgcc
ttggcgtatcattttgaaaagaatggactcaaaaccgatttagacagagtggggctggtg
catcggattgataaggatacctcgggacttttggtgattgccaagaacgagtatgcgatg
agtttcttagcgaaacaattttttgagcgtaccaccaagcgcctttattgggcgtttgtt
tggggcaatctccaagaagatgaaggcaccattagagggcatattgggcggcaccttaaa
aatagaatgcagatggcagtttttgaagatggcagccatggcaagcacgccgttacccat
tacaaagttttagaacgctttaaatatatgacttgggtagagtgtaagctggaaacagga
agaacgcatcaaattagagcccatttcaagcacattggtcatacgctttttaacgatgaa
cgctatgaagggcatcagatattaagaggcattaacctaccgaagtataagcaatttgtt
cggaatgtgtttgaagttctaccaaggcacgccctgcacgcgcacactttgggctttgta
caccctaccaccaaaaaggagttgtactttgaaagtcctatgccgcaggatatgcaacaa
gcggtggacaagtggcgcacctatttaggccgtgattaa
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