Rosa chinensis (China rose): 112199902
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Entry
112199902 CDS
T06020
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcn03032
]
112199902
03400 DNA repair and recombination proteins [BR:
rcn03400
]
112199902
Enzymes [BR:
rcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112199902
DNA replication proteins [BR:
rcn03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
112199902
DNA repair and recombination proteins [BR:
rcn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
112199902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HTH_36
Motif
Other DBs
NCBI-GeneID:
112199902
NCBI-ProteinID:
XP_040373788
LinkDB
All DBs
Position
4:complement(55423131..55430126)
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AA seq
926 aa
AA seq
DB search
MESDSDSDGSHISATPPRPKPTLISRPRSSQSNSKAKKLFSEPPAPARPDPSPLLSSDLP
FQILRRSPGQTLAIPTVDSFVTPGYFSKSAPSFSKNRRVSIDFDPDTYDPPSTFSPPNSK
PQPEAGISGSNYSAADWVPPQPEPKVEVANRSGVSSKIVKKNVNLIRGNAPLPPVKLKGG
AEGNFVKLNLNGRKRKFLNKGRRGSFSSSSRRKFYRKGKRKLTAQDGNEGDEDGLVTEAI
AEQQIRSQEDSKRAKKFDLEAFEEAVAAARSEPSDENLVKLLRLTYGYDSFRDGQLEAIK
MVLAGDSTMVVLPTGAGKSLCYQLSAVILPGVTLVVSPLIALMIDQLKQLPHMIRGGLLC
SSQTLEEVSGTIRLVQEGGIKVLFVSPERFLNGEFLSIFSATPISLVVVDEAHCVSEWSH
NFRPSYMRLRASMLRAKLNVNCILAMTATATATTLSSVMSALEIPPNNLIQKANLRDNLK
LSVSSSGNRMKDLLKLIKSTSFKDVQSIIIYCKFQFETEMISRYLCDNNINAKSYHSGIP
SKDRTHVQELFFTNKIRVVVATVAFGMGLDKRDIGSVIHYTLPESLEEYVQEIGRAGRDG
RLSYCHLYFDDNTYYKLRSLMYSDGVDEYVVNKFLCQVFTSDENLKGKIYSLVKETASRK
FDMKEEVMLTILTQLELGEVQYLHLLPEINVTCILNFHKTSPVLLAEKDVLIAAILKKSE
TKHGQCVFDIPTIANSIGVTTTILTNHLQNLKLKGEVTYEVKDQAYCYTIVEVPADLCSL
SAQLTKWLSEVESCKVRKLDAMFNAAVSAVNNCEKMEGCSDAQQTLCLQRKILEYFSEDN
VDVPNKMGKSSPFLQADIKVFLRSNSQAKFTPRAVARIMHGIPSPAYASAFWSKTHFWGR
YTHIDFQVVMEAAKAELINFVRKDAV
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgattcagactcagacggctctcacatctcggccactccgccgcggccaaag
cccacccttatctccagacctaggtcctctcaatccaactcaaaagccaaaaagctcttc
tccgaacccccggcccccgccagacccgacccgtctcctcttctctcctccgatttacct
ttccagatactccgccgctcgcccggtcaaaccctcgcgatcccgaccgtcgattccttc
gtcactcccggctacttctccaaatcggcgccgtcgttctcgaaaaaccgacgtgtcagc
atcgatttcgatccggacacatacgacccgccgtctactttctcaccgccgaattcaaag
cctcagccggaggctggtatctctggatctaactattctgcagccgattgggtaccgccg
cagccggagcccaaagttgaagttgctaataggtctggggtttcatccaaaattgtgaag
aaaaacgtcaatctgattcgaggtaatgctcctttgccgccggtgaagctcaaaggcgga
gccgaagggaactttgtgaagctcaacctgaacggaaggaagcgcaagtttctgaacaag
ggcagaagaggaagtttcagttcttcaagtcgtcggaaattttaccggaaaggtaaaaga
aaattgacagcgcaagatggaaatgaaggagatgaagatggcttggttacagaggcaatt
gcagagcaacagattcggagccaggaggacagtaaaagggccaagaaattcgacctggaa
gcgtttgaagaggcggttgcggcggctcggagtgagccgtccgatgagaacttggtgaag
ctgttgaggctgacttatggctatgattcgttccgagatgggcagctggaggcaatcaag
atggtgctggccggagattcgaccatggttgttctgccaacgggtgccggcaagtctttg
tgttatcagttgtctgctgtgattttacctggggtgactttggttgttagtccattgatt
gcattgatgattgaccagctcaagcagcttcctcatatgattcgcggtggtcttctttgt
agtagtcagacactggaagaagtttccgggacgattaggctggttcaagaagggggcata
aaagtgcttttcgtttccccagagagattcttgaatggagaattcctgtctatattttct
gctactcctatatctcttgttgtggtggatgaagctcattgtgtatctgaatggtcacac
aatttccggccatcatatatgaggctcagagcttctatgcttcgtgcgaagctcaatgtg
aactgcattcttgcaatgacagctactgccacagccacaacgttgagttctgtcatgtca
gctttagagattcctccaaacaatctcattcaaaaagccaacttaagggataatttaaaa
ctatcagtgtcatcaagtggaaatagaatgaaagatctgctgaagttgatcaagtctact
tcctttaaggatgttcagagcatcattatctactgcaaatttcagtttgaaacagaaatg
ataagcagatacttatgtgacaacaatatcaatgcaaagagttaccacagtggtatccct
tcaaaagatcgtacgcatgtgcaggagttattttttactaacaaaattagagtggttgtt
gcaactgtggcctttggcatgggccttgacaagagggatattggctctgtgattcattac
accttaccagaaagcttggaggaatatgttcaggaaatcggacgagctggacgggatgga
aggttatcctattgccatctttattttgatgacaacacatattacaaacttcgaagtctt
atgtatagtgatggagtggatgaatatgtggtaaacaaattcctctgccaagtattcacc
agtgatgagaacttgaagggaaaaatttattctttggttaaagaaactgcatcccgcaag
tttgatatgaaagaagaggtgatgctcacaattctaacgcagttggagttgggtgaagtg
cagtatttgcatttacttccagagataaatgtaacatgcattttgaattttcataagact
tccccagttttgcttgctgaaaaggatgttctcattgcagcaattctgaagaagtctgag
actaagcacggacaatgtgtgtttgacataccgactatagcaaatagcattggagttaca
actaccatcctaacaaaccatttacagaatttaaagttgaaaggagaagtaacatatgaa
gtgaaggaccaagcctactgttatacaattgtggaggtccctgcagatctttgttctcta
tcagcacagcttacaaaatggctatcagaggttgaaagttgtaaggtgcggaagttggat
gcaatgtttaatgcggcagtctctgctgttaataactgtgagaagatggaaggttgttct
gatgcccagcaaacactatgtttgcaaaggaagattttggagtatttcagtgaagataat
gttgatgtccctaataagatgggtaaaagcagcccatttttgcaagcagatataaaagtc
tttctacggagcaattcacaggccaaattcacccccagagctgttgcaaggatcatgcat
ggcattccaagtccagcatatgcttctgcattttggtctaaaactcacttctggggaaga
tatacgcatatagacttccaggtggtaatggaagcagcaaaggcggaattgatcaatttt
gtgaggaaggatgcagtctag
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