Rosa chinensis (China rose): 112200299
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Entry
112200299 CDS
T06020
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X2
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcn03036
]
112200299
Chromosome and associated proteins [BR:
rcn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112200299
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HARP
ResIII
Motif
Other DBs
NCBI-GeneID:
112200299
NCBI-ProteinID:
XP_024197093
LinkDB
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Position
4:53043601..53051857
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AA seq
769 aa
AA seq
DB search
MDFGADDDWNFSAEELDSLERDAFQKLSQQRINSASTCSCSSSSSSSSSFSFNRHHAHQS
LPTTTTTNSNAFESFIPNSFPNQVPPPLSPGARVLPSSLDVKVNPVERKLTVKFFLHATG
NIAAKFSYDQVLVAAFRKIPKATWNAKERLWMFPVSSLSSAEKVLHEVSGVNVEIENLDP
LVHRAIAAVSVVPDIRDLYDRIPSFIESKLLGFQREGVRYLVSLEFVPDLMSVVFNLHRI
LYSADDCEHGGRAFLADEMGLGKTLQAIAVASCIRDSWPVLILTPSSLRLQWASMIQQWM
NIPPSDISVVLSQCGGSNRAGYTLVSSSSKGTIHLDGLFNIISYDIVPKLQNLLMASDFK
IVIADESHFLKNAQAKRTTASLPVIKKAQYAILLSGTPALSRPIELFTQLEALYPDVYKN
VHEYGKRYCKGGTFGMYQGASNHEELHNLLKATVMIRRLKNDVLSELPVKRRQQVFLDLA
EKDMKQINALFRELEVVKLKIKACKSKEEVDSLKFMEKNLINKIYTDSAEAKIPAVLDYL
GTVIEAGCKFLVFAHHQSMIDAIYQFLLKKKVSCIRIDGSIPTVERQAYVTQFQEKDSVK
AAVLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNVYYLLANDTV
DDIIWDVVQSKLENLGQMLDGHENSLEVSASQPRNSPAKLKNSPAKPKYSPAKPKYSPAK
QKTLDSFLKVSTNQSNISPGKQKTLDSFLKRCNNSEDHEIEPKFKYPRQ
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggattttggggccgacgacgactggaatttcagcgcggaagagcttgattccctcgag
agagacgctttccagaaactctctcagcaacgcatcaactccgcttccacttgttcctgt
tcttcttcttcttcttcttcttcttccttttcattcaatcgccaccacgcacaccagtct
ttacccaccaccaccaccaccaacagcaatgccttcgaaagcttcattccgaattcattt
cctaaccaggtgccgccgcctttgtctcctggagccagagtattaccttcttctctagac
gttaaagtaaaccctgttgaacggaagctcactgtcaaattttttcttcatgctactgga
aacattgctgcaaaattttcctatgaccaggtgttggtagctgctttccgcaagatcccc
aaagccacatggaatgcaaaagaaaggttatggatgttccctgtgtcttctttgtcatcg
gcagaaaaagttcttcatgaagtatcaggagtcaatgttgagatagagaacttagatccc
ttagtccaccgggccattgctgctgtgtctgttgttccagatattcgagacctgtatgac
aggatacctagctttatcgaatcaaagctcttgggatttcagcgagaaggcgtaaggtat
cttgttagtctggagtttgttcctgatttaatgtctgttgtattcaacttgcataggata
ctatattctgcagatgattgtgagcatggagggcgtgcattccttgctgatgaaatggga
ctggggaagactttgcaggctattgctgtggcttcctgcattcgtgactcatggcctgtt
cttatactcacaccatcttcattgcgtctgcaatgggcctctatgattcaacaatggatg
aacattcctccatcagatattagtgttgttttgtctcaatgtgggggttcaaacagagct
ggatatacattagtatcctcaagttccaaagggaccattcatcttgatggcctatttaac
ataatctcttatgacatagtccctaaactacagaatctgctgatggcttcagattttaag
attgtgattgcagatgagtcgcactttttgaaaaatgctcaagcaaaaaggacaactgct
tccctgcctgtcatcaagaaggctcaatatgcaatactgttaagtggaactcctgcattg
tcccgaccgatcgaactatttacgcagctggaagccttgtatcctgatgtatacaaaaat
gttcatgaatatggcaaacgatattgcaagggtggaacatttggaatgtatcaaggtgca
agtaaccatgaagaattgcataatttgttgaaggcaacggtgatgattcggagactcaaa
aatgatgtactctctgaacttcctgtgaagcgcagacaacaggtcttcctagatttggct
gaaaaggacatgaaacaaatcaatgctttatttcgtgagttggaggtggtaaagctgaaa
attaaggcctgcaaatcaaaagaagaagttgattcacttaaatttatggagaagaatctt
atcaataagatttatactgattcagcggaggccaagatcccagcagttctggattacctg
ggaactgtcatcgaggctggttgcaagtttctagtatttgcacatcatcaatccatgatc
gatgcaatatatcagtttcttctgaagaagaaagtgagttgtattcgaattgatggcagt
atacctacagtagagaggcaagcatatgttacgcagtttcaagaaaaagattctgtcaag
gcagcagtgctatctatcaaagctggaggtgtgggattaactttaacagctgcaagcact
gtaatatttgcagaattgtcgtggactcctggtgacctaattcaagctgaagatcgtgct
cacagaattggccaggtgtcctcggtcaatgtatactaccttctagcgaacgacacagtt
gatgacatcatatgggatgttgttcagagcaagttggaaaatctgggacagatgctggat
ggccatgagaattcgttggaagtttcagccagccagccgcgaaatagccctgcaaagctg
aaaaatagccctgccaagccgaaatatagccctgccaagccgaaatatagccctgcaaag
cagaaaacactggattctttcttgaaagtttcaaccaaccagtcaaacatcagcccagga
aagcaaaaaacacttgattccttcttgaagcgttgcaacaacagtgaagaccatgaaatt
gagcccaaatttaaatacccaaggcagtaa
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