Rosa chinensis (China rose): 112200431
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Entry
112200431 CDS
T06020
Name
(RefSeq) CSC1-like protein At1g69450
KO
K21989
calcium permeable stress-gated cation channel
Organism
rcn
Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:
rcn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcn02000
]
112200431
Transporters [BR:
rcn02000
]
Other transporters
Pores ion channels [TC:
1
]
112200431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
DUF6594
Motif
Other DBs
NCBI-GeneID:
112200431
NCBI-ProteinID:
XP_024197230
LinkDB
All DBs
Position
4:complement(61575337..61579826)
Genome browser
AA seq
719 aa
AA seq
DB search
MLVSALVTSLAINSGLCVLFFTLYSILRKQPSNSEVYIPRVLAEGGYKKSSHFNLERLIP
SPDWLRRAWKLTEDDLLEASGLDAVVFMRLINFSLRVFLFAGVIGVFVLLPVNCSGDALE
YVDFADLSNNSLDVFSISNVASGSSLLWIHFSAVYLVTIFICCLLYYEYRYICEKRTSYF
LASKPQPHQFTILVRSIPVPVGSSVSDSVERFFSEYHPSTYLSHSVVRRTNKLQNLISDA
KKLYSRLVHLKSDPNKQKYKRSGTFGLFGPKVNLQDHYKKTLEDIEENVRLEQSEVSLAG
EEVRAAFVSFKSRYGAAIAFHLQQSTNPTRWVTEQAPEPHDVYWPFFSSSFIRRWISKLV
VIIACILLTILFLIPVVLVQGLTNLSQLEIYFPFLTSILTITFVSEVITGYLPSLILLLF
LKMVPPVMEGFSSIQGYISNSAIQKSACSKVLWFTVWNIFFATVFSGSVFYKISIFLDPK
NIPAKLASAVPAQASFFIAYVVTSGWTSTSSELFRIIPLLWSLMKRPFTDSKDDELEVPA
IPYHSHMPRILFFVLLGITYFFLAPLILPFLLVYLCLGYIIYRNQFINVYAPRYETAGKF
WPIAHNSVIFSLVLMHAIAVGVFTLKSIPVASTLTFPLPVFTLLFNEYCRKRFLPNFIAY
PAESLLKKDRQDENDPTMPEFYSKLVGVYQDPALMPINFSANGDRLNSPLLSASSSSHS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtctcggcgctggtgacgtcactggccataaactccggcctgtgcgttctcttc
ttcacgctctactccatcctgagaaaacagccgagcaactccgaggtctacataccgcga
gttttggccgaaggcgggtacaagaagagtagccatttcaatctagagaggctgattcct
tctcccgattggctccgaagggcctggaagctcaccgaggacgatttgctcgaggcgtcg
ggtttggacgccgtggtttttatgcggctcatcaatttcagcctgagagtgtttctgttc
gccggagttattggcgttttcgtgctgcttccggtgaactgctccggcgatgcgctcgag
tacgttgacttcgccgatctgtctaataactcattggatgtgttcagtatttcaaatgtt
gctagcggctcaagcttgttatggattcacttttcggcagtgtaccttgtcaccatcttt
atctgctgtctactctattatgaatatagatatatctgtgaaaagaggaccagttatttt
cttgcatccaagccacaaccacatcagttcaccatcctagttcgcagcattcctgttcct
gtagggagcagcgtcagtgatagtgttgagagattctttagcgagtatcatccttctaca
tatctgtcacatagtgttgttcgtcgaacaaacaaacttcagaatctcattagtgatgca
aaaaaattgtatagcagactcgttcacttgaagtcagatcccaataagcaaaagtataaa
cgttccggtacttttgggttgttcggacccaaggttaatctacaagatcattacaaaaag
acgcttgaggacatagaggagaatgtgagattggagcaatcagaggtttcgttagcagga
gaagaagttcgagctgcgtttgtgtccttcaagtctcggtatggtgccgcaattgctttc
cacttgcaacaatcaaccaatcctacgcgatgggtcacagagcaagctcctgaaccacat
gatgtttactggcccttcttttcctcatcattcattcgaagatggatatctaagctggtg
gttataattgcttgcattcttcttacaattctattcctcattcctgttgtacttgttcaa
ggtctcactaacttaagccagttggaaatctactttcccttcctcacgagcattctaacc
ataacatttgtcagtgaagtcattacaggataccttcccagtctcattcttctgttattt
ctgaaaatggtgcctcctgtcatggagggtttttcatccattcaaggctatatttctaat
agtgcaatacaaaagagtgcgtgttcaaaagtactttggttcacagtatggaacattttt
tttgctactgtattttctggatccgtattctacaagatttccatctttcttgatcctaag
aacattcctgcaaagctagcttctgctgttcctgcacaggcgtcctttttcattgcatac
gttgtcacatcaggatggacgagtacttcatcagaactctttcgcataattcctttactt
tggagtctaatgaaaagaccttttactgacagtaaagatgatgaacttgaagttccagcc
attccttaccatagtcacatgccaagaattctcttttttgtacttcttggtatcacatac
ttctttctagctccactaattctgcccttcctattggtgtacctctgtcttggatacata
atctatcgtaatcagttcataaatgtatatgcgcctcggtatgaaactgcagggaagttc
tggccaatcgctcacaattcagttatattttctctggtacttatgcacgctattgcagtt
ggagtctttacactgaagagtatccctgtagcatcaaccctaactttccctcttcctgtg
ttcacacttctttttaatgagtactgccggaaacgcttcctgcccaattttattgcctat
cctgctgagagtttgttaaaaaaggacaggcaagatgagaatgatcctactatgcctgaa
ttttacagtaaattggttggtgtctatcaagacccggctttgatgcctatcaatttttct
gcgaacggtgacagactcaacagccctcttctatctgcttcttcttcaagtcattcatga
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