Ricinus communis (castor bean): 8265140
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Entry
8265140 CDS
T01087
Name
(RefSeq) putative ABC transporter B family member 8
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8265140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8265140
04147 Exosome [BR:
rcu04147
]
8265140
04090 CD molecules [BR:
rcu04090
]
8265140
Enzymes [BR:
rcu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8265140
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8265140
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8265140
CD molecules [BR:
rcu04090
]
Proteins
8265140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
Zeta_toxin
AAA_22
AAA_21
ABC_ATPase
AAA_29
RsgA_GTPase
PRK
AAA_30
Motif
Other DBs
NCBI-GeneID:
8265140
NCBI-ProteinID:
XP_015571690
LinkDB
All DBs
Position
3:27725742..27732456
Genome browser
AA seq
1237 aa
AA seq
DB search
MEMDSPKKNEIRREEGKSVAIIFRYADWVDILLMLMGTVGAIGDGMSTNILLVFASHIMN
SLGYGKTQQNQGNFMVEVEKCSLYFVYLGLAVMVVAFMEGYSWSKTSERQVLKIRYKYLE
AVLRQEVGFFDSQEATTSEIINSISKDTSLIQEVLSEKVPIFLMHASVFISGLAFATYFS
WRLSLVAYPTLLLLIIPGMIYGKYLLFLSKKSQREYSKANSIVEQALSSIKTVYSFTAEK
SIIDRYSAILDKTSKLGIKQGIAKGLAVGSTGLSFAIWAFLAWYGSHLVMYKGESGGRIY
AAGISFILGGLSLGMALPDLKYFTEASVAAKRIFNRIDRVPEIDGEDTKGLVLEKMQGEI
EFQHVRFTYPTRPDSIVLKDFNLKAEAGKTVALVGASGSGKSTAIALVQRFYDVNGGFVK
IDGVDIRTLNLKWIRGKMGLVSQEHALFGASIKDNIMFGKLDATMDQVTAAAMAANAHNF
IRQLPEGYETRVGERGALLSGGQKQRIAIARAIIKNPVILLLDEATSALDSESETLVQNA
LDQASMGRTTLVVAHKLSTIRNADLIAVVNNGCIIEIGSHNDLINRKNGHYANLAKLQRQ
FSYNDHEQNPETHVSSVGKSSAGRISTGRSSPAIFASPLPVVDIPKPVCHPPPSFSRLLS
LNSPEWKQGLMGSLSAIAFGAVQPFYALTIGGMIAAFFAPSHEEMHARIRTYSSIFCSLS
LISIIVNLVQHYNFAYMGERLTERIRIRMLEKVLTFETAWFDEEKNSSGALCSRLSNEAS
MVKSLVADRVSLLVQTTSAVTIAMIMGLVVAWKLALVMIAVQPLTILCFYTRKVLLSTIT
TNFVKAQNHSTQIAAEAVHNHKIVTSFGSTQKVLQLFDDAQEEPRKEARKKSWLAGIGMG
SAQCLTFMSWALDFWYGGTLVQKREISAGDVFKTFFILVSTGKVIAEAGSMTSDLAKGST
AVASVFQILDRQSLIPVVSSSNAKDGASGTKLEKLTGRIEMKRIDFAYPSRPETLILRQF
CLEVKSGTSIGLVGKSGCGKSTVIGLIQRFYDVERGSVQVDGMDIRELDILWYRRHTALV
SQEPVLYSGSIRDNIVFGKLDACENEVVEAARAANAHEFISSLKDGYETECGERGVQLSG
GQKQRIAIARAIIRNPTIILLDEATSALDVQSEQVVQEALDRTMIGRTTVVVAHRLNTIK
KLDSIAFVADGKVVEQGTYSQLKNKRGAFFNLATLQT
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggattctcccaagaagaatgagataagaagggaagagggcaaatctgttgcc
attatatttagatatgcagattgggttgatatattgcttatgttgatgggtactgttgga
gctataggagatggcatgtcaactaacattttgcttgtctttgctagccacataatgaat
agcttgggatatggtaagacccaacaaaatcaaggaaattttatggttgaagtagaaaag
tgcagtctatattttgtgtacttgggattagcggtcatggtggtggcttttatggaaggt
tattcctggagcaaaacgagtgagagacaggtcctaaagattcgttataagtatctggaa
gcggttcttcgacaagaagttgggttttttgattcacaagaagcaactacttcagaaatc
atcaatagcatatcaaaagatacttctctaatacaggaagtactcagtgaaaaggtgccc
atatttttgatgcacgcatctgtgttcatctcaggacttgcatttgccacttacttttca
tggaggctgtcactagtagcttatccaactctacttcttttaattatccctggaatgatt
tatggaaaataccttctcttcttgtccaagaaatctcagagagagtacagcaaagcgaac
tccattgttgagcaggccttaagctccatcaagactgtttattcattcactgctgagaag
agcattatagatagatattcagcaatattggataagacatcaaagcttggaattaaacaa
ggcatcgcgaaaggtcttgccgtaggaagcactggactttcttttgcaatatgggcattt
cttgcttggtatggaagtcatttggtgatgtacaaaggagaaagtggagggaggatctat
gctgctggcatttcttttatattgggaggactatcccttggaatggcacttcctgacctg
aaatacttcacggaagcttctgttgcagcaaaacgaatattcaacaggatcgacagagtt
cctgaaattgatggtgaagatacgaaaggacttgtattagagaaaatgcagggtgaaata
gaattccaacatgtcagattcacatacccaactcgtccggattccattgtcctcaaagat
ttcaacctgaaagctgaagcaggaaaaacagttgctctagttggtgcaagtggaagtgga
aagtccactgccattgcattggtgcaaaggttttatgatgtgaatggtggatttgtcaag
atcgatggcgttgatataagaacattaaatttaaagtggataagagggaaaatgggtctt
gttagtcaagaacatgcattatttggggcatcaattaaagataatatcatgtttggaaag
cttgatgctacaatggaccaagtcacagctgcagcaatggctgcaaatgctcataacttt
ataaggcagcttccagagggttatgaaacaagggttggagaacgaggagcacttttatct
ggtggccaaaagcagcgaattgctattgctagagcaatcatcaagaatcctgtaattctc
ctacttgatgaagcaacgagtgctcttgattctgagtctgagacattagttcaaaacgct
cttgatcaagcctccatgggaaggactacactggtggttgcccacaagctctctacaatt
cgaaacgcagacctcattgcagttgttaacaatggatgcatcattgaaataggttcacat
aatgatctcattaacagaaaaaatggccactatgcaaaccttgcgaagttacagaggcaa
ttcagctataatgaccatgaacaaaatcctgaaacacatgtttcttcagttggaaaaagc
agtgctggccgaataagcacaggaagatcaagtcctgctatctttgcttcaccattacct
gttgtcgatatcccaaaacctgtgtgtcaccctccaccttccttctctaggctgctttcg
ctgaactctcctgaatggaagcaaggcctaatggggagcctctcagctatagcctttggc
gctgtccagccgttctatgccttaaccatcggtggcatgatcgcagcattctttgcaccg
agccacgaggaaatgcacgctagaatacgtacatactcttccattttctgctcactgtcc
ttgatttccatcattgtgaatcttgtgcaacattacaatttcgcttatatgggtgagagg
ctaacagagagaatcagaataagaatgctagagaaggtcttgacttttgagaccgcttgg
tttgatgaagagaaaaactccagtggggctttatgttcaagattgagcaatgaagcctca
atggttaagtcccttgtagcagacagagtttctttgttagtccaaacgacttctgcagtc
acaatagcaatgatcatgggactagttgtagcttggaaacttgcacttgtcatgatcgca
gtacaacctcttacaattctatgtttctacactcgaaaagttttgctctctaccatcaca
acaaactttgtcaaggcacaaaatcatagtactcaaatcgccgcagaagctgtccataat
cataaaattgttacttcatttggaagcacacagaaggtacttcaactgtttgatgatgct
caagaggaaccaagaaaggaggcaaggaaaaaatcatggctagcaggaattggtatgggt
tctgctcagtgcctaactttcatgtcatgggctctagatttttggtatggaggaactcta
gttcaaaaaagagagatatcagctggcgatgtgtttaaaacatttttcattcttgtgagc
accggaaaggttatagctgaagcaggaagcatgacttctgatttagccaaaggttccact
gcagtggcatctgtgtttcagattcttgacaggcaatctctaattccagtagtctcctcc
tccaacgcaaaggatggagctagtggaaccaagctagaaaagttaactggaaggatagag
atgaagaggattgattttgcatatccaagcaggccagaaacgttaatattacgccaattt
tgcttggaagtgaagtcagggacaagcattggactggtagggaaaagtgggtgtggaaaa
tcgaccgtgattggattgattcaaagattttatgatgttgagagaggatcagttcaagta
gatggaatggacataagggaactagatattctgtggtataggaggcacaccgcgcttgtt
agccaagaaccggtgctatattccggcagcatccgtgacaacattgtgttcggaaagctt
gatgcatgtgaaaatgaagtggtggaggccgccagggctgctaatgctcatgaatttatc
tcatcattgaaagatgggtacgaaacagaatgtggggaaagaggagtgcaactatcagga
gggcaaaagcaaagaatagcgatagcaagagctataatccgcaacccaacaataatatta
ctagacgaggcaacaagtgcacttgacgtgcaatctgaacaagttgtgcaagaagcatta
gaccggactatgataggacgaacaacagtggtggtggctcatcggcttaacacgatcaag
aagctcgattcaattgcctttgttgcagatgggaaagtggtggagcagggaacatacagt
cagctaaagaacaagagaggtgcattctttaacctagccacccttcagacctag
DBGET
integrated database retrieval system
