Ricinus communis (castor bean): 8272419
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Entry
8272419 CDS
T01087
Name
(RefSeq) soluble starch synthase 1, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00500
Starch and sucrose metabolism
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
8272419
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcu01003
]
8272419
Enzymes [BR:
rcu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
8272419
Glycosyltransferases [BR:
rcu01003
]
Polysaccharide
Storage polysaccharide
8272419
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Motif
Other DBs
NCBI-GeneID:
8272419
NCBI-ProteinID:
XP_015573219
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All DBs
Position
1:complement(31948549..31958564)
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AA seq
643 aa
AA seq
DB search
MESLWITHQRFCQSFPKLINAHHSFSPISNAQLGFTYLLTERCKNVSLSVVRSDNRGGLA
NSPEGSSAVEDVKEEKGGHMLAADRDESGSAIGFNLISQSGDSLVKADEAVADRVEDSVD
IESREKAQTKVKHNIVFVTAEAAPYSKTGGLGDVCGSLPIALADRGHRVMVVSPRYMHGS
PQDKNFANAVDLNCRIKIYCFGGEQEVSFYHEYRAGVDWVFVDHPSYHRPGNPYGDSNGA
FGDNQFRFTVLCHAACEAPLVLPLGGYTYGEKCLFLANDWHAGLVPVLLAAKYHPYGVYK
DARSVLVIHNLAHQGVESAVTYKNFGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGA
VVTADRILTVSKGYSWEITTVEGGYGLHDLLSSRRSVLNGITNGIDVSEWDPSSDKHITF
HYSVDDLSGKVQCKMALQKELGLPINPDCPLIGFIGRLDYQKGIDLIRWAVPELMEEEIQ
FVMLGSGDPLYEDWMRGAESTYKDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQ
LYAMKYGTIPVVHATGGLRDTVETFNPYAQEGIGEGTGWTFSPLSKESMLVALKLAIKTY
RDHKSSWEQIMRRGMERDSTWENAAIQYEQVFEWAFIDPPYVS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctatggatcacccatcaacggttttgtcaatcgtttccaaaattaataaat
gcccatcacagttttagtcccataagcaatgctcaactgggttttacttatttgctcaca
gaaaggtgtaaaaacgtctccttgtctgttgtaagatcagataatagaggtggccttgcc
aattcaccggagggttcctctgctgttgaagatgtgaaggaagagaagggggggcacatg
ttggctgctgacagagatgagtctggttctgctattgggtttaacttgatttctcagtct
ggtgacagcctagtgaaagctgatgaagctgtagctgatagagtcgaagattctgtggac
attgaaagcagagagaaagctcaaaccaaagtaaagcacaacattgtttttgttactgct
gaagcagcaccatattcaaagactggtggattaggagatgtttgtggttctttgcctata
gcattggccgaccgtggacatcgtgtaatggttgtttcccccagatacatgcatggcagt
cctcaagacaagaattttgctaatgctgtagatttaaattgtcgtatcaagatatattgc
ttcggaggggagcaagaggtctccttttatcatgagtatagggcaggtgttgattgggtt
tttgtggaccatccttcataccaccgacctggaaacccatatggtgatagcaatggtgca
tttggtgacaatcagtttaggttcactgttctttgtcatgcagcatgtgaagctccattg
gtgcttccacttggaggttatacctatggagagaaatgtctcttccttgctaatgactgg
catgctggccttgtccctgtacttttggctgctaaatatcatccgtatggagtttataag
gatgcccgaagtgttcttgtgatacataaccttgcgcatcagggagtggaatctgcagtg
acatataaaaattttggactgccttcagagtggtatggggcactggaatgggtcttcccc
acgtgggcaaggactcatgctcttgacacaggtgaagctgtaaatgtactaaagggtgcg
gttgtgacagctgaccgaatactcacagttagcaaggggtattcttgggaaataacaact
gttgagggtggatacgggctgcatgatttgttaagcagtaggaggagtgttttgaatggg
atcaccaatggcattgatgtttctgaatgggacccctcatcagataagcatatcactttc
cattactctgtcgatgatctctctggaaaggttcagtgtaagatggctttgcagaaagaa
ttaggtcttcctattaacccagattgtccattgattggatttattgggagactggactat
caaaaaggcattgacctgatacggtgggcagttcctgagctgatggaagaagaaattcaa
ttcgtaatgctaggatctggagacccactgtatgaagactggatgagaggagcagaatca
acttacaaagacaaatttcgaggttgggtaggatttaatgtcccaatttcccataggata
actgcaggatgtgacatattattaatgccctcaagatttgagccatgtgggctaaatcaa
ttgtacgctatgaaatatggaaccataccagtagttcatgccactggaggacttagggat
actgtggagacttttaatccatacgctcaagaagggattggtgaaggcactggatggact
ttttctccactatcaaaagaaagcatgctggtggcattaaaacttgctatcaagacatac
agagatcataaatcatcatgggagcaaataatgagaagaggcatggaaagagactccact
tgggaaaatgctgcaattcaatatgagcaagtttttgaatgggcatttattgatccaccc
tatgttagctaa
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