Roseobacter denitrificans: RD1_1611
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Entry
RD1_1611 CDS
T00376
Symbol
sucD
Name
(GenBank) succinyl-CoA synthase, alpha subunit
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00020
Citrate cycle (TCA cycle)
rde00640
Propanoate metabolism
rde00660
C5-Branched dibasic acid metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Module
rde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD1_1611 (sucD)
00640 Propanoate metabolism
RD1_1611 (sucD)
00660 C5-Branched dibasic acid metabolism
RD1_1611 (sucD)
Enzymes [BR:
rde01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RD1_1611 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABG31238
RoseoBase:
RD1_1611
UniProt:
Q169V5
LinkDB
All DBs
Position
complement(1555436..1556323)
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AA seq
295 aa
AA seq
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MAVLIDENTKVICQGLTGSQGTFHSEQAIAYGTKMVGGVTPGKGGQTHLDLPVFNSVHEA
KHATEANASVIYVPPPFAADSILEAIDAEMELIVCITEGIPVLDMMKVQRALEGSKSRLI
GPNCPGVITPDACKIGIMPGHIHKRGSCGVVSRSGTLTYEAVKQTTDLGLGQSTAVGIGG
DPIKGTEHIDVLEMFLADPETTSIIMIGEIGGSAEEDAAQFLADEKKKGRWKPTAGFIAG
RTAPPGRRMGHAGAIVAGGKGGAEDKIDAMRAAGIVVADSPATLGEAVQEAIAKG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacttatcgacgaaaacaccaaggtgatctgtcagggtctgaccggctcgcag
ggcacctttcactccgaacaggccatcgcttacgggacaaaaatggtgggcggcgtgacc
cccggcaagggcggacagacgcatctggacctgccggtgttcaactccgtgcatgaggcg
aaacatgcgaccgaggccaacgcctccgtgatctatgtgccgcccccctttgccgccgac
agcatccttgaggcgattgatgccgagatggaactcatcgtctgcatcaccgaaggcatc
ccggtgctggacatgatgaaggtgcagcgcgcgcttgaggggtccaaatcccgactgatt
ggcccgaattgtcccggggttatcacgccggatgcgtgtaaaatcggcattatgccggga
catatccacaagcgtggatcttgcggtgtcgtgtcacgctccggcacgctgacctatgag
gcggtcaagcagaccaccgatctggggctgggccagtccaccgccgtcggcattggtggt
gatccgatcaagggcaccgagcacatcgacgttttggaaatgttccttgcggacccagag
accaccagcatcatcatgatcggcgaaattggcggctccgccgaggaagacgcggcacag
ttcctcgccgatgaaaagaaaaagggccgctggaagccgactgccggattcatcgcgggc
cgcacagcccctcccggtcgtcgcatgggccacgcaggtgcgattgttgccggtggcaag
ggcggtgccgaggataagatcgacgccatgcgcgccgctggcatcgtcgtcgccgacagc
cccgcaacgctgggcgaagcggttcaggaagcgattgcgaaggggtga
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