Rhizorhabdus dicambivorans: CMV14_26130
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Entry
CMV14_26130 CDS
T05084
Symbol
traA
Name
(GenBank) Ti-type conjugative transfer relaxase TraA
Organism
rdi
Rhizorhabdus dicambivorans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MobA_MobL
AAA_30
AAA_19
SH3_13
Viral_helicase1
AAA_11
PIF1
PhoH
AAA_22
DUF2442
Helicase_RecD
AAA_16
UvrD_C_2
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ATE68030
UniProt:
A0A2A4FNX5
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All DBs
Position
p4:complement(8024..11131)
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AA seq
1035 aa
AA seq
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MAIYHFSAKIISRANGSSAVASAAYRAAERLHDDRLGRDHDFSNKAGVVHSEIMAPQGAP
ERLNDRATLWNEVEAREKRKDAQLAREVEFSIPRELNQQQGVQLAREFVEKQFVERGMVA
DMNVHWDLGKDGQPKPHAHVMLSMREVGPEGFGQKVREWNSTALLQEWREAWADHVNERL
AELDIDARIDHRTLEAQGIDLEPQHKIGPAASRMPDQGLEAERVEDHARIARENGEKIIA
RPEIALDAISRQQATFTRRDLAQFAFRHSDGKDQFDQVMSAVRTSPELVALGKDGRGEDR
FTSRDMIDTEQRLERAGDRLAGREAHGLPAMEQSLRSTAGSEGLKLGSQQEAALAHITGG
KDIAIVVGYAGTGKSTMLGVARDEWERAGYQVRGAALSGIAAEGLEGGSGIQSRTIASME
YQWGQGRELLGPRDVLVIDEAGMIGTRQMERVLSEASQAGAKVVLVGDAEQLQAIEAGAA
FRSLAERYGAAEINEVRRQHEDWQRDATRALATGRTGEAIHAYEQHGMVHAAETREAARA
ELIDTWDAQRLADPDKTRIILTHTNAEVRDLNLAARDRLRDAGELGQDVRISAERGVREF
ASGDRIMFLKNERGLGVKNGTLGQVVRVSPDSMAVRLDDGRRVAFDLKDYAHVDHGYAAT
IHKSQGVTVDQGHVLATPGMDRHSAYVALSRHREGAQIHYGRDDFADVSRLVRTLGRERA
KDMASDYPMYRDRDAEAQSFADQRGLSGEIRVADAPERKGVELLGPRAGTMRQMGEDPRA
VRDAGDRGAGDAKAAAERQLRRGMFGGLKLSAERPAPAQERAQGDKPKRGMFAGLKLDAT
PATPAPAKAHEQNQDRAFVRAVEWASRSSEAVLQSRASGAPVLEHQKVALERAVQALDQI
RPGASDDMVAAYRRDPVLLHDAAAGRSGPMIEAMRQEARVRADPALRADRFVERWQQLSQ
DRDRLYRAGDMTGREKAGKEMAGMAKSLERDPQVESILRDRLRELGLEIGMSQSRDLGRE
LSRGLEIGRDRGMSR
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctaccatttctcggccaagatcatcagccgcgccaacggatcgagcgccgtt
gccagcgcggcctatcgcgcggcggaacggctgcacgatgaccgactcgggcgcgaccat
gatttctcgaataaggccggcgtcgttcattcggaaatcatggctccgcaaggtgcgcca
gagcgtttaaacgatcgcgcgaccttgtggaacgaggtcgaggcccgcgagaagcgcaag
gacgcgcagcttgcccgcgaggtcgagttctcgattccgcgcgagctgaaccagcagcag
ggcgtccagcttgcccgcgagttcgtcgaaaagcagttcgtggaacgcggcatggtcgcg
gacatgaatgtgcattgggacctggggaaggacgggcaacccaagccgcacgcgcatgtc
atgttgtcgatgcgcgaagtagggccggagggcttcggccagaaggtgcgcgagtggaac
agcacggcgctcttgcaagaatggcgcgaggcctgggccgatcacgtcaacgagcggttg
gccgagctggatattgacgcccgcatagatcatcggacgttggaggcgcaggggatcgac
ctagagccgcaacacaagatcgggccggctgcgtcgcggatgcccgaccaggggcttgag
gccgagcgggtcgaggaccatgcccggatcgcgcgcgagaatggcgagaagatcattgcg
cggcccgagatcgcattggatgcgatctcgcgccaacaggcgacgttcacccggcgcgac
ctggcgcagttcgcgttccgccacagcgacggcaaggatcagttcgatcaggtgatgagc
gcggtacggacctcgcccgagctggtggcgctggggaaggatgggcgcggcgaggatcgc
tttacctcccgcgacatgatcgacaccgagcaacggttggagcgcgccggcgatcggctt
gcaggacgggaggcgcatggtctcccggcgatggagcagtccttacggtccaccgccggg
agtgagggccttaagctggggagccagcaggaagccgcgctggcgcatataacagggggc
aaggatattgccatcgtcgtcggctatgctggcaccggcaaatcgaccatgttgggcgtt
gcgcgcgacgaatgggagcgggccggctatcaggtacgcggtgcggcgctgtcggggatc
gcggccgagggcttggaaggcggctccggcatccagtcgcgcacgatcgccagcatggaa
tatcagtggggccagggccgcgagctgctaggcccgcgtgacgtgctggtgatagacgag
gccgggatgatcggcacgcgccagatggagcgcgtgctgtccgaggcaagccaagcaggg
gcgaaggtggtccttgtcggcgacgccgagcagttgcaggcgatcgaggccggcgcggcg
ttccggtcccttgccgagcgctacggggcggccgagatcaacgaggttcgccgccagcat
gaggactggcaacgcgacgcgacgcgggcgctggcgacgggtcgaaccggcgaggcgatc
catgcctatgagcagcacggcatggtccacgcggccgagacgcgcgaggcggcgcgggcc
gagctgatcgacacatgggacgcgcagcggcttgccgatcccgacaagacgcggatcatc
ctcacccacaccaatgccgaggttcgggatttgaacctggccgcgcgcgatcggctgcgc
gacgccggcgagctggggcaggacgtgcggatttcggccgagcggggcgtgcgggagttc
gccagcggcgaccgcatcatgttcctcaagaacgagcgcggactaggcgtgaagaacggc
acgctgggccaggtcgtgcgcgtgtcgcccgacagcatggcggtgcggcttgacgatggc
cgccgcgtcgcattcgacctgaaagattatgcccatgtcgatcatggctatgccgcgacc
atccacaaatcgcagggcgtgacggtcgatcaggggcatgtgctggcgacgccggggatg
gaccgccattccgcctatgtggcgctgtcgcggcaccgtgagggagcgcagatccattac
ggccgcgatgacttcgccgacgtgtcccggcttgtccgcacgctggggcgcgagcgggcg
aaggatatggcgtctgactatccgatgtatcgggaccgggacgccgaggcgcagtcgttc
gccgatcagcgcgggctgtcgggcgagatccgcgttgcggatgcacccgagcggaagggc
gtggagcttctaggtccgcgggcgggcaccatgcgccagatgggcgaagatccacgcgcg
gttcgcgatgccggcgaccgcggcgctggcgatgcgaaggccgcggccgagcgacagctg
cggcgcggtatgttcggcgggttgaagctgtcggccgagcgcccagcgccggcgcaagag
cgcgcgcagggcgacaagccgaaacgcggcatgttcgccggcttgaagctcgacgcgacg
ccggcgacgccggcgccggccaaggcccacgagcagaaccaggaccgcgcctttgtccgc
gccgtcgagtgggcgtcgcgctcgagcgaggcggttttgcaatcccgcgcatcgggcgcg
cccgtcctcgagcatcagaaagtcgcgctcgagcgcgcggtgcaggcgctcgaccagatc
aggccgggagcgtcggacgatatggtcgcggcctacaggcgcgatccagtcttgctgcac
gacgcagcggcggggcgcagcggcccgatgatcgaggcgatgcgccaagaagcgcgcgtg
cgcgccgatcctgccttgcgcgccgatcggttcgtagaacgctggcaacagctctcccag
gaccgcgaccggctttatcgcgccggcgacatgacgggccgtgagaaggcgggcaaggaa
atggcgggcatggcgaaaagccttgagcgcgatccacaggtggaatcgatcctgcgcgac
cgcttgcgcgagctggggctagagatcggcatgagccagagccgcgaccttggccgcgaa
ttgtcgcgggggttggagatcggccgcgatcgaggaatgagccgatag
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