Rothia dentocariosa: HMPREF0733_10538
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Entry
HMPREF0733_10538 CDS
T01343
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn03420
Nucleotide excision repair
rdn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0733_10538 (pcrA)
03430 Mismatch repair
HMPREF0733_10538 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_10538 (pcrA)
Enzymes [BR:
rdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0733_10538 (pcrA)
DNA repair and recombination proteins [BR:
rdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0733_10538 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HMPREF0733_10538 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
AAA_25
DEAD
Rab3-GTPase_cat
Motif
Other DBs
NCBI-ProteinID:
ADP39996
UniProt:
E3H0Z3
LinkDB
All DBs
Position
complement(595847..598720)
Genome browser
AA seq
957 aa
AA seq
DB search
MSEPTNSASGVEPAADTLFADLENTQPPYDPEYDAHIPPEDTSAPEEDPFAHESFMPELN
PEAVNAQTVTAHEDALGEFMPPAYRVGGYGSEYNPEDPYGERTYSLGTIDPATLIDGLND
RQREAVLHSGSPLLIVAGAGSGKTRVLTHRIAHLLATGRATPGQILAITFTNKAAAEMRE
RIQALIGPRAQHMWISTFHSFCVRVLRREAKALGLKSTFTIYDSADSQRLLTLIIKELNL
DTKKFAPKAVGHRISALKNELVSAEEYSAAAANNPWEKTIAQIYTVYTQRLRAANSLDFD
DLIGKTVFLLKKFPEIANYYRRKFRHILVDEYQDTNHAQYALVRELVGAHPQGNAREQGP
YPDAPPPGELTVVGDSDQSIYAFRGADIRNITDFESDYPNAHIILLEQNYRSTQNILSAA
NAVIERNPNRRPKKLWTASGEGTKIVGYVAESEHAEARYIAQEIDRLADEHGIKPSDVAI
FYRTNAQSRALEELLMRAGLPYRVVGGTRFYERKEIKDALAYLRALTNPDDDVSVRRILN
EPKRGIGAKSETVVADYASAQRISFFAAARAAAAEPGSVPGLGAAAVKKYAEFVKLMDDL
AQIARTESAATTLEAVLEQSGYLAALRESKDIQDESRVENLSELLDAMVEFEAENPGADL
EQFLEHVSLVADADSIPSRGASADGQTPSAAQIAAEAAEAKAQGMITLMTLHTAKGLEFP
VVFLTGLEHGLFPHQRALTDEGEMSEERRLAYVGLTRAMQRLYVTRSETRTMWGKSQFNP
PSPFLEEIPEELIEWRRLGGFAGFGASGMGAYANGASGYGGYGQGGYRGASGYNSGGGRN
ADGRGLDKGSAGGYGTGYDESRSRASREPSTAAVNGSASYGLAAAASASGAVRNRSRVHQ
GKEIPQLKVGDTVRHTKFGEGRVLALEGTGDKTVAKVRFASEEKRLLLRYAPLEKVS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccaccaactccgcatccggcgttgagcctgccgcagataccctctttgcc
gatcttgaaaacacgcagccgccctacgatcccgaatatgatgcccatattccgccggaa
gatacctccgcgcccgaagaagaccccttcgctcacgaatcttttatgcccgagctcaac
cctgaagcggtgaatgcccaaaccgtcaccgcccatgaggatgcgctcggcgagttcatg
ccgcccgcctaccgagtaggcgggtacggaagcgagtacaatcccgaggacccttacggg
gagcgcacctattcgctgggcaccatcgaccctgcaaccctgatcgacgggcttaacgac
cggcagcgcgaagctgttttacactccggttcgcccttgctgatcgtcgccggggccggg
tctggcaaaacccgcgtgctgacgcaccgcatcgcccatctgctcgcaaccgggcgggcg
actcccgggcagattctcgccatcactttcacgaacaaggccgcagcggaaatgcgtgag
cgcatccaagcgctgatcggcccgcgcgcacagcacatgtggatttccaccttccacagc
ttctgcgtgcgcgtgctgcgccgagaagccaaggcactcgggctcaaatccaccttcacg
atctatgattcggcggattcacagcgcctgctcacgctcattatcaaagagctgaacctg
gatactaaaaagttcgcccccaaggccgtggggcacaggatttccgccctcaaaaacgag
ctggtgagcgccgaagaatacagtgcggcagccgcgaataacccgtgggaaaagactatc
gcgcagatttacaccgtctacactcagcgccttcgcgccgcgaactccctcgactttgac
gacctcattggcaaaaccgtgtttttgctcaagaagttccccgaaatcgcaaactattat
cgccgcaaattccggcatattctggtggacgaataccaagacaccaaccacgcccagtac
gcgctcgtgcgggagttggtgggggcgcatccgcagggaaacgctcgcgaacaggggccg
tacccggatgctccaccgcccggcgaactgaccgtcgtgggcgactcagaccagtcgatt
tacgccttccgcggcgctgacattcgcaatattacggatttcgagagcgactaccccaac
gcacacattattctgctggagcagaactaccgttccacgcagaacattctctctgccgcg
aacgccgtgattgagcgcaaccccaaccgccgccccaagaagctgtggacggcatcgggg
gagggcaccaaaatcgtggggtacgtcgccgaatcagagcatgcggaggcacgctacatc
gcccaagaaatagaccggcttgccgacgaacacggcatcaaaccctcggatgtggcgatt
ttctaccgcaccaatgctcaatcccgcgcccttgaagaactgctgatgcgcgccggactg
ccgtaccgcgtggtcggtggcacccggttctatgagcgcaaagaaattaaggatgcgctc
gcctacctgcgcgccctcacaaacccggacgacgatgtgagtgtgcggcgtattctcaac
gaacctaaacgcggtatcggcgcgaaatctgagaccgtggttgccgattatgcttcggca
cagcgaatttcgtttttcgccgccgctcgtgccgctgctgccgagccggggagtgtgccg
ggtttgggcgctgctgccgtgaaaaagtatgcggaattcgtcaagctcatggacgatctc
gcccagattgcacgcaccgaatcggccgccacaaccttagaggcggtgcttgaacagtcc
ggctatctcgccgccctgcgcgagtctaaggatattcaggacgaatcccgggtggaaaac
ctctcggagctgctggatgcgatggtcgagtttgaggcggagaaccccggcgcggactta
gaacagttcttagagcatgtctcgctggtggcggatgccgactcgattccgtcccggggt
gcctccgcagacgggcagaccccgtctgccgcgcagattgccgccgaggccgcggaggcg
aaggcgcagggcatgatcaccctgatgaccctgcacaccgctaaaggcctggagttcccg
gttgttttcctgaccgggctggaacacgggctgtttccgcatcagcgggcgctgaccgac
gagggcgagatgagcgaggaacgtcgccttgcctatgtggggctcacgcgcgcgatgcag
cggctctacgtaacccgctccgagacccgcacgatgtggggcaagagccagttcaacccg
ccctcacccttcctggaagagattcctgaggaactgatcgagtggcgccgcctgggcgga
tttgccgggtttggtgcctccgggatgggcgcatacgccaacggtgccagcgggtatggt
ggctacgggcaaggcggctatcgcggggcgagcggatacaactccggcggcgggcgcaat
gctgatgggcgcggcttagataagggcagcgcgggcggctacggcacgggatacgatgaa
tcccgctctcgggcgagccgtgagccatcaaccgccgcggtcaatggttcggcaagctac
ggtttggcggccgcagccagcgcatccggggcggtgcgcaaccgctcgcgggtgcatcaa
ggcaaggaaattccgcagctgaaggtgggcgatacggtgcgccacaccaagttcggtgag
ggcagggttctcgctctggaaggcaccggcgataagaccgtggcgaaggttcgttttgcc
tccgaagagaagcggctgctgctgcggtacgcgccgttggagaaagtctcgtag
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