Roseateles depolymerans: RD2015_646
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Entry
RD2015_646 CDS
T04166
Name
(GenBank) Putative transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rdp01011
]
RD2015_646
Enzymes [BR:
rdp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RD2015_646
Peptidoglycan biosynthesis and degradation proteins [BR:
rdp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RD2015_646
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
ALV05143
UniProt:
A0A0U3LJX6
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All DBs
Position
complement(732592..734652)
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AA seq
686 aa
AA seq
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MKFARITVTALALGAIGLSPLPSIAQAPTPFAVVPNPPPPNADLVLDARDAWQKRDRARL
AADRQAALDQQHPLAPWFDYWDLNSRLSEATQPEVSAFYARWPGSYVEDRLRNDWLLELG
HRRDWANFRRDHASYKMQDDREVVCYALLADPALERSKELREQARSAWLNQRDSDEGCHL
LATTLLETGKLKDTDVWLKMRQAVEANRPRVIKQVSGLLTKAETQSLTELMDKPDRYLKR
KGAARPRAQAELTALALQRLAVQDPSTATDDVQAWAARLPTDLAAWVWVQLGRQAALRQQ
EVASDRFDRALRLQARAGVPMEWSDDTLSWIARAALRADGGNGRPEQLLEAIALMKPSEQ
RDAAWVYWKAKAQQTLAAKGPAGDAQRKEALDALRGLASPLHYYGKLAADELRLRLPLPP
QPADLTPQERAAALSMPGVSRAMQLLAVGLRSEGQREWNFTMRGLGDRELLAVAQAACER
ELWERCISTSERTRQEIDLNTRYPMPYRADVFRTAAASGLDPTYVYGLIRQESRFMMDAR
SHVGASGLMQVMPATAKWTAKKLGLDVKPEMLHDRDVNLRLGTGYLKLVLDSFDGSQAMA
AAAYNAGPNRPRRWREGSTLDAAIWTENIPINETRDYVRKVLSNATVYAQLMGREGGTQL
RERLGRVIGPAGTTAAVAQDLPANGN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgctcggatcactgtaaccgccctggcgcttggcgccatcggcctgtcgccg
cttccttccatcgcgcaggcgcccacgccctttgcggtggtccccaatccgccgccgccc
aatgccgacctggtgctggacgcgcgcgatgcctggcaaaagcgcgaccgcgcccggctg
gccgccgaccgccaggccgccctggaccagcagcatccgctggccccctggttcgactac
tgggacctcaacagccgtctgtccgaagccacccagcctgaggtcagcgcgttttatgcg
cgctggcccggcagttacgtggaagaccggctgcgcaatgactggctgctggagctgggc
caccgccgcgactgggccaacttccggcgcgaccatgccagctacaagatgcaggacgac
cgggaagtcgtctgttatgcgctgctggccgacccggccctggagcgcagcaaggaactg
cgcgagcaggcccgcagcgcctggctcaatcagcgcgacagcgacgaaggctgccatctg
ctggccaccacgctgctggagaccggcaagctcaaggacaccgacgtctggctgaagatg
cgccaagcggtcgaggccaaccggccgcgggtcatcaagcaggtcagcggtctgttgacc
aaggccgagacccagtccctgaccgaactcatggacaagcccgaccgctatctcaagcgc
aagggcgccgcccggccgcgtgcgcaggcggaactgaccgccctggcactgcagcgcctg
gcggtgcaggacccgtccaccgccaccgacgacgtgcaggcctgggccgcccgcctgccc
accgacctggccgcctgggtgtgggtgcagttgggccgtcaggccgcgctgcgccagcag
gaagtggccagcgatcgtttcgatcgtgccctgcgcctgcaggcccgggccggtgtgccg
atggaatggagcgacgacaccctcagctggattgcccgggccgccctgcgcgcggacggc
ggcaacggccggccggagcagttgctggaggccatcgccctgatgaagccgtcggagcag
cgcgatgccgcgtgggtgtactggaaggccaaggcccagcagacgctggccgccaagggc
cccgccggcgacgcccagcgcaaggaagccctggacgcgctgcgcggcctggcctctccc
ctgcactactacggcaagctcgccgctgatgaactgcggctgcgtctgccgctgccgccc
cagccggccgacctcacgccgcaggagcgtgcggcggccctgtcgatgccgggggtgtcg
cgggcgatgcaactgctggccgtgggcctgcgcagcgaaggccagcgcgaatggaacttc
accatgcgcggtctgggcgaccgggagctgctggccgtcgcccaggcggcctgtgagcgc
gaactgtgggaacgctgcatctccaccagtgaacgcactcgccaggagatcgacctcaac
acccgctatcccatgccctaccgcgccgatgtgttccgcaccgccgccgcgtcggggctg
gacccgacctatgtctacggcctgatccgccaggaatcgcgcttcatgatggatgcccgc
tcgcatgtcggcgcctccggcctgatgcaggtgatgccggccaccgccaagtggaccgcc
aagaagttgggcctggacgtgaagccggagatgctgcacgaccgggacgtgaatctgcgc
ctgggcactggctacctgaagctggtgctggacagcttcgacggctcgcaggccatggcg
gcggcggcctacaacgcgggccccaaccggccgcggcgctggcgggaaggctcgacgctg
gatgccgccatctggaccgagaacatccccatcaacgagacccgggactacgtgcgcaag
gtgctgtccaacgccacggtttatgcccagctgatgggccgtgagggcggcacgcagctg
cgcgaacgcctgggccgcgtcatcgggcctgccggcaccacggccgccgtggcccaggac
ctgccggccaacggcaactga
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