Rhizobium etli bv. mimosae Mim1: REMIM1_PD00244
Help
Entry
REMIM1_PD00244 CDS
T02778
Name
(GenBank) uracil-DNA glycosylase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
REMIM1_PD00244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rel03400
]
REMIM1_PD00244
Enzymes [BR:
rel01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
REMIM1_PD00244
DNA repair and recombination proteins [BR:
rel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
REMIM1_PD00244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGS24857
UniProt:
S5SS76
LinkDB
All DBs
Position
pRetMIM1d:complement(271228..271869)
Genome browser
AA seq
213 aa
AA seq
DB search
MNIAANIGPALALEVADAESIAELRHQAEDCTRCDLYRNATQIVFGEGPGKAEIVLVGEQ
PGDREDITGRPFVGPAGHLLDLCLNEAGLDRQRCYVTNAVKHFKFTPRGKRRLHAKPNAG
EIRRCAWWLGAELNILQPKLVVALGASALYALLGPKAKLTPERGHILQPANHPPVLVTIH
PSYLLRIRDEAEQDRQHQAFVSDLHRAAEFQLR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgccgcaaacatcggccccgccttggcgctcgaagtcgcggatgcagaaagc
attgccgaactccggcatcaggccgaggactgcacccgctgtgacctctatcgcaatgcg
acgcaaatcgtcttcggtgaaggtccgggaaaggccgagatcgtcctagtcggtgagcag
ccgggtgaccgggaggatatcaccggccggccctttgtcggcccggcaggccatctgctc
gacctctgtctcaatgaggccggcttggaccgtcaacgctgctacgtcactaatgccgtc
aagcacttcaagttcacgccgcgcggcaagcggcggctgcatgcgaaacccaatgccggc
gagataaggcgttgcgcttggtggctcggcgcggaactcaacatcctgcagccgaaactc
gtggtggcgcttggcgcaagcgctctctatgcgctgctcgggccgaaggcgaaattgacg
cccgagcgcggtcatatcctgcagcctgcaaaccatccgccggttctggtgaccatccac
ccctcctatctcctgagaatccgcgatgaggccgagcaggacaggcagcaccaggcattc
gtgtcagatctgcacagggcggcggaatttcagcttcggtga
DBGET
integrated database retrieval system
