Rhizobium etli bv. mimosae Mim1: REMIM1_PF00414
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Entry
REMIM1_PF00414 CDS
T02778
Name
(GenBank) RNA polymerase sigma factor protein
Organism
rel
Rhizobium etli bv. mimosae Mim1
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
HTH_24
Sigma70_r4
HTH_28
KORA
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AGS26080
UniProt:
S5S835
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Position
pRetMIM1f:438672..439328
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AA seq
218 aa
AA seq
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MRASHRDVNGNAVVNAMIENKDKLLKTIESVVKSRSYSEDIFQDGVIKACGVKTDDIRCP
IGYAFRMVYNLALDESRRQRQQVNNYRSIDQVQEMTAPIPTVLDQLVAAETLRDVLASLE
ALPKRTNDAFIRHRLNGVPQKDIAAELGVSRTLVNFMIKAAEEHCHLAITEPARPDHDRP
RDITASRRAAPAANRSTAIPVLPAQQQNGSSARSRRTG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcatcgcatcgtgatgtgaacggaaatgccgtggtcaacgccatgatcgaaaac
aaggacaagctcctcaaaacgattgaaagcgttgtcaaatcaagatcatattctgaggat
atatttcaggacggagtgataaaagcgtgcggggtcaaaaccgacgacatccggtgcccg
atcggttacgcatttcggatggtctataatctcgccctcgacgagagccgccgacaacgc
cagcaggtaaacaactataggtcgatagaccaggttcaagaaatgacggcgcccattccc
accgtgctcgatcagctggtcgccgcagaaaccctgcgcgatgtgctggcttcgctcgag
gcgctgccgaagcgcaccaacgacgccttcatccgccatcgcctgaacggcgtgccgcag
aaggatatcgcggccgaactcggtgtctcccgaacgctcgtcaacttcatgatcaaggcg
gcggaagagcattgccatctggcaatcaccgagcctgcccgccccgatcacgaccgcccg
cgcgatatcaccgcttcgcggcgtgcagcgcctgctgcaaatcgctccacagcaattccg
gttcttccagcccaacagcaaaacggatcgtctgctcgctcacgccgaaccggatga
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