Prescottella equi: REQ_03180
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Entry
REQ_03180 CDS
T01352
Name
(GenBank) putative DNA polymerase III beta chain/MerR family transcriptional regulator
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
req
Prescottella equi
Pathway
req03030
DNA replication
req03430
Mismatch repair
req03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
req00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
REQ_03180
03430 Mismatch repair
REQ_03180
03440 Homologous recombination
REQ_03180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
req03032
]
REQ_03180
03400 DNA repair and recombination proteins [BR:
req03400
]
REQ_03180
Enzymes [BR:
req01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
REQ_03180
DNA replication proteins [BR:
req03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
REQ_03180
DNA repair and recombination proteins [BR:
req03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
REQ_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
DNA_pol3_beta_2
DNA_pol3_beta
MerR-DNA-bind
Motif
Other DBs
NCBI-ProteinID:
CBH46457
UniProt:
A0A3S5Y1N9
LinkDB
All DBs
Position
337827..338885
Genome browser
AA seq
352 aa
AA seq
DB search
MSASGPDDLVTIGVFARACGLTPSALRFYDDSGLSPAHIDPVTGYRYYSTTQRDRAATIR
RLREIDVPLEAVTRMLSADRVEAARVLDEHVRLLHERAATAAAVAAELKASLPVQDRGSA
VTLSARLLAEAVRQVRRAAAAEAEFPILTGILIEVGDGAVVLTATDRYRLSTRSLPAHTP
DRAWTGVVSASELDAIGAALSPDAAAILRPDSGAVDIATPGLSARFAVLEGEYPDYRTML
DALPPARTRVVTRRDELFAVAEGPVDDTVRLVGASGQLTASVRDGPPQAVAARVDGPDVT
LTFRRGNLLAALETAVGPDVMLDISAPDLPVVFRSATDGDLTTLAMPTASDI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcatccgggccagacgacctcgtcaccatcggtgtcttcgcgcgggcctgcggg
ctgaccccgagcgcgctgcggttctacgacgacagcgggctctcgcccgcgcacatcgac
ccggtgacgggctaccggtactacagcacgacccagcgcgaccgcgccgcgaccattcga
cggttgcgggagatcgacgtcccgctcgaggccgtgacacggatgctctcggccgatcgg
gtcgaggccgcccgcgtgctcgacgagcacgtccgccttctgcacgagcgcgccgccacg
gccgccgccgttgccgcggagctgaaggcctcgctgccggtgcaggatcgtgggagtgcg
gtgaccttgtcggcgcgtctgctcgcggaggccgtccggcaggtgcggcgtgccgcggcc
gccgaggcggagttcccgatcctcacggggatcctgatcgaggtcggcgacggcgccgtc
gtgctgacggccaccgaccgctaccggctgtccacccggagcctgccggctcacacgccc
gaccgtgcgtggacgggcgtggtgtccgcgtccgaactcgacgcgatcggcgcagccctg
agccccgacgctgcggcgatcctgcgtcccgattccggtgccgtggacatcgccaccccc
ggcctctctgcccggttcgctgtgctggagggcgagtaccccgactaccggacgatgctc
gacgcgttgcctccggcccgtacccgggtggtcacccgccgcgacgagttgttcgccgtc
gccgaaggcccggtggacgacaccgtccgcctcgtcggcgcgtccggacaactgacggcg
agtgtgcgggacggtccgcctcaggcggtggcggctcgtgtcgacggacccgacgtgacc
ctgaccttccgtcgtggaaacctgctggccgcgttggaaactgccgtcggcccggacgtc
atgctcgacatctccgccccggacctgcccgtcgtgttccgctccgcgaccgacggcgac
ctcacgacccttgcgatgccgaccgcgtcggacatctag
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