Rhodococcus fascians D188: A3L23_00923
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Entry
A3L23_00923 CDS
T04328
Symbol
nei1_2
Name
(GenBank) Endonuclease 8 1
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
rfa
Rhodococcus fascians D188
Pathway
rfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A3L23_00923 (nei1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfa03400
]
A3L23_00923 (nei1_2)
Enzymes [BR:
rfa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A3L23_00923 (nei1_2)
DNA repair and recombination proteins [BR:
rfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A3L23_00923 (nei1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AMY52276
UniProt:
A0A165L939
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All DBs
Position
complement(996846..997649)
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AA seq
267 aa
AA seq
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MPEGDTVHALAARLRRALDGVTLRAGRLNVPAHAVENLAGRTVVAHRTHGKHLFTDFDDD
TTLHTHLRMTGSWSVVRAGRSIPRRVQPDVRVRLAAVDGPTAYGILLPVVDYGYTASMNA
LVAHLGPDPLHAEFDTDRAASNILAQGSRPIVSTLLDQRVIAGPGNLWANELCFLRGLWP
WAPSAGVDAEKLVTLLERAMRHSASTPGAIQVTTGDTRRGRTHWVAGRAGKPCLRCATVI
RVEADVPNDPDRRRTWWCPHCQPEPGL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggtgacaccgtccatgcgctcgccgcgcgattgcggcgagcgctggacggc
gtcacgctacgggcagggcgactgaacgtgcccgcacacgccgtcgagaatctcgccggg
cgaaccgtcgtcgcgcaccggacgcacggcaagcatctgttcaccgatttcgacgacgac
accacgttgcacacccacctccgcatgacgggatcgtggtcggtggtgcgagccggccgc
tcgataccgcggcgggtgcagcccgacgtccgggtgcggctggccgcggtggacgggccg
accgcgtacggaatcctgttgccggtcgtcgactacgggtacacggcctcgatgaatgcg
ctggtcgcgcatctgggaccggacccattgcatgccgagttcgacaccgatcgtgcggca
tcgaacatcctcgcgcagggttctcggccgatcgtctcgaccctcctggatcagcgggtc
atcgcggggcccggaaatctatgggcgaacgagctgtgttttctgcgtggactgtggccc
tgggctccgtcggcaggcgtcgacgcggagaaattggtgactctgctcgagcgggcgatg
cggcattcggcgagcacccccggggccatacaggtcaccaccggcgacactcgtcgcggc
cggacccactgggttgccggtcgggccggtaaaccgtgtctgcggtgcgcgaccgtcatt
cgtgtcgaggccgacgtgccgaacgaccccgatcgacgtcgaacatggtggtgtccgcac
tgccagccggagccagggctgtga
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