Roseomonas fluvialis: Rmf_16300
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Entry
Rmf_16300 CDS
T08992
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfl03009
]
Rmf_16300
Enzymes [BR:
rfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Rmf_16300
Ribosome biogenesis [BR:
rfl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rmf_16300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BDG71701
LinkDB
All DBs
Position
complement(1652739..1653776)
Genome browser
AA seq
345 aa
AA seq
DB search
MSTPIPITNALSAATPSPSPETAAGRVERIAPPEAAGMRADRFLADAIGSLSRSRVKALI
EDGRATRDATPLTDPSETVRAGARYAIDIPAPVAATPLAQAIPLTILFEDRDLIVLDKPA
GLVVHPAPGNLDGTLVNALLAHAGDDLPGIGGEKRPGIVHRLDKDTSGVMVAAKTERAHR
TLSEAFANRDLDRAYVALAWGLPAPTSGEVVAPIGRHPGDRKRMAVVDRGGKPATTRYAV
QRAWGAAVARVECRLLTGRTHQIRVHLAHIGHPIVGDPVYLRRTPAAARSLTAPVRDALL
AFPRQALHAATLGFNHPVTGQPLSFASPVPADMAALVALLDGNAP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccccatcccaatcaccaatgccttgagcgccgccacgccatccccctcgccc
gaaaccgccgccgggcgcgtcgaacgcatcgccccgcccgaggccgccggcatgcgcgcc
gaccgcttcctcgcggacgcgataggttcgctctcgcgctctcgcgtcaaggcattgatc
gaggacggccgcgcgacgcgcgacgccaccccgctcaccgacccgtccgagacggtgcgc
gccggcgcccgctacgccatagacattcccgccccggtcgccgctacgccgctggcgcaa
gccatcccgctgaccatcctgttcgaggaccgcgaccttatcgtgctcgacaagcccgcg
ggcctcgtcgtgcaccccgcgccgggcaacctcgatggcacgctggtgaacgccctgctt
gcccatgcgggggatgacctgcccggcatcggaggcgaaaagcgcccgggcatcgtgcat
cggctcgacaaggacacatcgggcgtcatggtcgcggcgaagaccgaacgcgcccatcgc
acgctgtcggaagccttcgccaaccgcgacctggaccgcgcctatgtcgcgctcgcctgg
ggcctgcctgcgcccaccagcggcgaggtcgtggccccgatcggccgccaccccggcgac
cgcaagcggatggcggtggtcgaccgcggcggcaagcccgccaccacgcgctatgcggtg
cagcgcgcctggggcgcggcggtggcgcgggtggaatgccggctgctgaccggtcgcacc
caccagatccgcgtccacttggcgcatatcggccacccgatcgtcggcgacccggtctac
ctgcggcgtacacccgcggccgcacggtcgctcacggcgccggtgcgcgacgcgctgctc
gccttcccacgccaggcgctgcatgcggcgacgctcggcttcaaccacccggtcaccggc
caaccgctatccttcgcgagccccgtgccggccgacatggcggcattggttgcgttgctg
gatggtaacgcgccgtaa
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