Roseomonas fluvialis: Rmf_19370
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Entry
Rmf_19370 CDS
T08992
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00260
Glycine, serine and threonine metabolism
rfl00460
Cyanoamino acid metabolism
rfl00630
Glyoxylate and dicarboxylate metabolism
rfl00670
One carbon pool by folate
rfl00680
Methane metabolism
rfl01100
Metabolic pathways
rfl01110
Biosynthesis of secondary metabolites
rfl01120
Microbial metabolism in diverse environments
rfl01200
Carbon metabolism
rfl01230
Biosynthesis of amino acids
rfl01240
Biosynthesis of cofactors
Module
rfl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rmf_19370 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Rmf_19370 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rmf_19370 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Rmf_19370 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Rmf_19370 (glyA)
Enzymes [BR:
rfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Rmf_19370 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BDG72008
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All DBs
Position
1987258..1988592
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AA seq
444 aa
AA seq
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MIRPAPTPARSPDGAAGAAPPAASFFGASLAAADPAIAAAVAQELTRQQDGIELIASENI
VSRAVLEAQGSVLTNKYAEGYPGRRYYGGCEAVDIAERLAIERACQLFGCGFANVQPHSG
AQANQAVFLALLQPGDTFMGLDLAAGGHLTHGSPANQSGKWFKPVPYTVRREDQRIDMAE
VRRIALESKPKVIIAGGSAYARTWDFAGFRAIADEVGAIFMVDMAHFAGLVAGGAHPSPF
PHAHVVTTTTHKTLRGPRGGMILTNDEALAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEA
LRPDFRAYAAAIVANAQALAEELKAQGLDLVTGGTDNHLLLVDLRPKKLNGKIAEAALNR
AHLTCNKNAIPFDPEKPMVTSGVRLGTPAGTTRGFGTVEFREIGKLIGEVLDGAAASNAD
GVNTAVETAVAAKVLELCRRFPVY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatccgccccgcccccacccccgcccgctcccccgacggtgccgccggcgccgccccg
cccgctgccagcttcttcggtgcctccctggccgccgccgaccccgccatcgccgccgcc
gtcgcgcaggagctcacgcgccagcaggacggaatcgagctcatcgcgtccgagaacatc
gtctcgcgcgccgtgctcgaggcccagggctccgtcctgaccaacaagtatgcggaaggc
taccccggccggcgctactacggcggctgcgaggccgtggacatcgccgagcgcctggcc
atcgaacgcgcctgccagctgttcggctgcggcttcgccaacgttcagccgcattccggc
gcccaggccaaccaagccgtcttcctggccctgctgcagccgggcgacaccttcatgggc
ctggatctcgccgccggcgggcacctgacgcacggatcgccggccaaccagtcgggcaag
tggttcaagccggtgccctacacggtgcggcgcgaggaccagcggatcgacatggccgag
gtccggcgcatcgcgctcgaatcgaagcccaaggtgatcatcgccggcggctcggcctat
gcccgcacctgggatttcgctggcttccgtgccatcgcggacgaggtcggcgcgatcttc
atggtcgacatggcgcatttcgcgggcctggtggccggcggcgcgcatccgtccccgttc
ccccatgcgcatgtcgtgaccaccaccacgcacaagacgctgcgcggcccgcggggcggc
atgatcctcacgaatgacgaggcgctggccaagaagttcaactcggccgtctttccgggg
ctccagggcggcccgctgatgcacgtcatcgccgccaaggcggtcgctttcggcgaggcg
ctgcgccccgacttccgcgcctatgccgccgccatcgtggccaatgcgcaggcgctggcc
gaggagctgaaggcccagggcctggacctggtcaccggcggcaccgacaaccacctgctg
ctggtcgacctgcgccccaaaaagctgaacggcaagatcgccgaggccgcgctcaaccgc
gcccacctgacctgcaacaagaacgccatccccttcgacccggaaaagccgatggtgacc
tccggcgtgcggctcggcacccccgccggcaccacgcgtggttttggcacggtggagttc
cgcgagatcgggaaactgatcggcgaggtgctcgacggggccgccgcgtctaacgccgat
ggcgtgaacaccgcggtcgagacggccgtcgcggccaaggtgctggagctctgccgccgc
ttccccgtgtactga
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