KEGG   Roseomonas fluvialis: Rmf_19370
Entry
Rmf_19370         CDS       T08992                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
rfl  Roseomonas fluvialis
Pathway
rfl00260  Glycine, serine and threonine metabolism
rfl00460  Cyanoamino acid metabolism
rfl00630  Glyoxylate and dicarboxylate metabolism
rfl00670  One carbon pool by folate
rfl00680  Methane metabolism
rfl01100  Metabolic pathways
rfl01110  Biosynthesis of secondary metabolites
rfl01120  Microbial metabolism in diverse environments
rfl01200  Carbon metabolism
rfl01230  Biosynthesis of amino acids
rfl01240  Biosynthesis of cofactors
Module
rfl_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:rfl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Rmf_19370 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    Rmf_19370 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Rmf_19370 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    Rmf_19370 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Rmf_19370 (glyA)
Enzymes [BR:rfl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     Rmf_19370 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1 Beta_elim_lyase
Other DBs
NCBI-ProteinID: BDG72008
LinkDB
Position
1987258..1988592
AA seq 444 aa
MIRPAPTPARSPDGAAGAAPPAASFFGASLAAADPAIAAAVAQELTRQQDGIELIASENI
VSRAVLEAQGSVLTNKYAEGYPGRRYYGGCEAVDIAERLAIERACQLFGCGFANVQPHSG
AQANQAVFLALLQPGDTFMGLDLAAGGHLTHGSPANQSGKWFKPVPYTVRREDQRIDMAE
VRRIALESKPKVIIAGGSAYARTWDFAGFRAIADEVGAIFMVDMAHFAGLVAGGAHPSPF
PHAHVVTTTTHKTLRGPRGGMILTNDEALAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEA
LRPDFRAYAAAIVANAQALAEELKAQGLDLVTGGTDNHLLLVDLRPKKLNGKIAEAALNR
AHLTCNKNAIPFDPEKPMVTSGVRLGTPAGTTRGFGTVEFREIGKLIGEVLDGAAASNAD
GVNTAVETAVAAKVLELCRRFPVY
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgatccgccccgcccccacccccgcccgctcccccgacggtgccgccggcgccgccccg
cccgctgccagcttcttcggtgcctccctggccgccgccgaccccgccatcgccgccgcc
gtcgcgcaggagctcacgcgccagcaggacggaatcgagctcatcgcgtccgagaacatc
gtctcgcgcgccgtgctcgaggcccagggctccgtcctgaccaacaagtatgcggaaggc
taccccggccggcgctactacggcggctgcgaggccgtggacatcgccgagcgcctggcc
atcgaacgcgcctgccagctgttcggctgcggcttcgccaacgttcagccgcattccggc
gcccaggccaaccaagccgtcttcctggccctgctgcagccgggcgacaccttcatgggc
ctggatctcgccgccggcgggcacctgacgcacggatcgccggccaaccagtcgggcaag
tggttcaagccggtgccctacacggtgcggcgcgaggaccagcggatcgacatggccgag
gtccggcgcatcgcgctcgaatcgaagcccaaggtgatcatcgccggcggctcggcctat
gcccgcacctgggatttcgctggcttccgtgccatcgcggacgaggtcggcgcgatcttc
atggtcgacatggcgcatttcgcgggcctggtggccggcggcgcgcatccgtccccgttc
ccccatgcgcatgtcgtgaccaccaccacgcacaagacgctgcgcggcccgcggggcggc
atgatcctcacgaatgacgaggcgctggccaagaagttcaactcggccgtctttccgggg
ctccagggcggcccgctgatgcacgtcatcgccgccaaggcggtcgctttcggcgaggcg
ctgcgccccgacttccgcgcctatgccgccgccatcgtggccaatgcgcaggcgctggcc
gaggagctgaaggcccagggcctggacctggtcaccggcggcaccgacaaccacctgctg
ctggtcgacctgcgccccaaaaagctgaacggcaagatcgccgaggccgcgctcaaccgc
gcccacctgacctgcaacaagaacgccatccccttcgacccggaaaagccgatggtgacc
tccggcgtgcggctcggcacccccgccggcaccacgcgtggttttggcacggtggagttc
cgcgagatcgggaaactgatcggcgaggtgctcgacggggccgccgcgtctaacgccgat
ggcgtgaacaccgcggtcgagacggccgtcgcggccaaggtgctggagctctgccgccgc
ttccccgtgtactga

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