Roseomonas fluvialis: Rmf_44010
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Entry
Rmf_44010 CDS
T08992
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Rmf_44010 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_44010 (ku)
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Rmf_44010 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BDG74472
LinkDB
All DBs
Position
complement(4597440..4598372)
Genome browser
AA seq
310 aa
AA seq
DB search
MPVRATAATPPRFRFMATRPSWEGHLRLSLVSCPVALYNASSREGDVSFRLINPTTGNRV
RQLTVDAETGTPVERKELVRGFETSKDRYVLLTDEEIRSVRLESTRTIDIERFVKLEDID
RIWWEDPYYLAPAQKAGVEAFVVIREALRESGRVALGRLVLHTRERLVALEPRGRGILVT
TLRSHDEIRPEEEAFAAIPDRKADARMVEIAEQIIAQQHGAFDPSAFVDRYEDALRDLIA
RKDDGGDGGVTAPPPEPDNVIDLMEALKRSLSGKAAKAKPVAAAAAAKATPARAKAKAAP
AAKPVRRRSR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtgcgtgcaaccgcagccacaccgccgcgtttccgcttcatggcaacgcgtcca
agctgggaggggcacctgcggctgtccctcgtgtcgtgtcccgtcgcgctctacaacgcg
tcctcgcgcgagggcgacgtcagcttccggctcatcaatcccaccaccggcaaccgcgtg
cggcaactgaccgtggacgccgagaccggcacacccgtcgagcgcaaggaattggtgcgt
ggcttcgagacgtcgaaggaccgctacgttctcctcaccgatgaggagatccgcagcgtt
aggctcgagagtacgcgcacaatcgacatcgagcggttcgtcaagctcgaagacatcgac
cggatctggtgggaggatccctactatctggcgcccgctcagaaggccggcgtggaggcc
ttcgtggtgatccgcgaggcgctgcgcgagagcgggcgtgtcgcgctgggacgactcgta
ctgcacacccgggaacgcctggttgcgctcgagccgcgcgggcgcggcatcctggtgacc
acgctgcgcagccacgacgagatccgacccgaggaagaggctttcgccgccatcccggat
cgcaaggccgatgcgcggatggtggagatcgccgagcagatcatcgcccagcagcacggc
gcctttgacccttctgcgttcgttgaccgctacgaggatgcgctgcgcgacctcatcgcg
cgaaaggatgacggcggggacggcggcgtcaccgctccgccgccggaacccgacaatgtg
atcgacctgatggaggcgctgaagcgcagcctgtccggcaaggcggcaaaagcgaagccg
gtcgccgccgccgccgccgcgaaggcgacgcctgcgcgggccaaggccaaggccgcgccg
gccgcgaaacccgtgcgccgtcgctcgcgctga
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