Rhodoferax ferrireducens: Rfer_1459
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Entry
Rfer_1459 CDS
T00334
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rfer_1459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_1459
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rfer_1459
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Rfer_1459
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
RecR_ZnF
HHH_5
DZR
Motif
Other DBs
NCBI-ProteinID:
ABD69192
UniProt:
Q21YG1
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Position
1569292..1569882
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AA seq
196 aa
AA seq
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MADLNSLDVLIQALRRLPGVGVKSASRMAFHLLQHDRPGALALSRALQVAADQMRHCERC
HTFTQADICATCLDPRRDASKLCVVETPADQSALERTGAYHGLYFVLMGKLSPLDGIGPK
DIGLKGLFDRACDGTVQEVILATNFTAEGEATAHVISEGLKSRGLRLTRLARGVPVGSEL
EYVDLGTIAHALLDRR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtggctgatctcaactcgcttgacgtcctgatccaggcgctgcgccgtctgccgggtgtg
ggcgtgaagtcggcttcgcgcatggcgtttcacctgctgcagcatgaccgtccaggtgcg
ttggcgttgtcccgagccctgcaagttgccgctgatcaaatgcgtcattgcgagcgttgc
cacaccttcacgcaggccgatatttgtgccacctgcctggacccccggcgcgatgccagc
aagttgtgtgtggtggagaccccggccgatcagtcggcgctggagcgcaccggcgcgtac
cacggtttgtactttgtgctgatgggcaaactcagtccactcgatggcataggccccaag
gacatcggtctcaaaggtttgtttgaccgggcttgcgacggcaccgtgcaggaagtgatt
ctggccaccaacttcacggccgagggcgaagccaccgcgcatgtgatcagcgaaggcctg
aaaagccgggggctgcgcctgacccgtctggcgcgtggtgtgccggtgggcagcgagctg
gagtatgtggacttgggcaccattgcgcatgctctgctggatcgacgctga
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