Rathayibacter festucae: C1I64_16380
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Entry
C1I64_16380 CDS
T06173
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rfs
Rathayibacter festucae
Pathway
rfs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1I64_16380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfs03019
]
C1I64_16380
Enzymes [BR:
rfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
C1I64_16380
Messenger RNA biogenesis [BR:
rfs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C1I64_16380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
GvpK
Motif
Other DBs
NCBI-ProteinID:
AZZ53454
UniProt:
A0A3Q9UZG5
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All DBs
Position
3580718..3582142
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AA seq
474 aa
AA seq
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MHSVQTALETLRALAATPTVARLAEAFAAQGHELALVGGPVRDAFLGHGVHDLDFTTSAR
PDDIVRIVAPIAEAHWDIGRAFGTIGARVAGETVEITTYRSDSYDGVSRKPEVEFGDSLE
GDLVRRDFTVNAMALRLPEIVLVDPSGGVEDLLAGRLRTPAAADLSFGDDPLRMLRGARF
TSQLGFRTTDEVEWAMAELAPRIDDVSAERIQEELRKLLATASPRAGLELLVDTGLTGYF
LPELPALRLEQDEHHHHKDVYVHSLTVLEQAIALEEQRNPGAAPDVTLRIAALLHDIGKP
ATRRLEPGGAVSFYHHDLVGSKLAIKRLRSLKFDKQTIADVARLIELHLRFFGYTEGAWT
DSAVRRYVTDAGPLLERLHILTRADVTTRNTRKADRLAHAYDDLEQRIAELAEKEELASK
RPDLDGTQIMAILDLPPGREVGLAYKFLLELRLEEGPLGEEEAARRLKEWWAAR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgtccagaccgccctcgagaccctccgagctctcgcggcgacgccgacggtg
gcccggctcgcggaggcgttcgccgcgcagggccacgagctcgcactggtcggcggcccc
gtccgcgacgccttcctcggccacggcgtgcacgacctcgacttcaccacctcggcgcgg
ccggacgacatcgtgcggatcgtcgctccgatcgccgaggcgcactgggacatcggccgc
gcgttcggcacgatcggcgcgcgggtcgcgggcgagacggtggagatcaccacgtaccgc
agcgacagctacgacggcgtcagccgcaagcccgaggtcgagttcggcgacagcctcgag
ggggacctcgtgcgccgcgacttcaccgtcaacgcgatggcgctgcggctgcccgagatc
gtgctcgtcgatccgtccgggggagtggaggacctgctcgccggccggctgcgcacgccg
gccgccgccgacctctccttcggcgacgacccgctgcggatgctgcgcggcgcgcggttc
acctcgcagctcggcttccggacgaccgacgaggtcgagtgggcgatggccgagctggcc
ccgcgcatcgacgacgtctccgcggagcggattcaggaggagctgcggaagctcctcgcg
accgcctcgccccgggccggactcgagctgctcgtcgacaccggtctgaccggttacttc
ctccccgagctgccggccctgcgcctggagcaggacgagcaccaccatcacaaggacgtc
tacgtgcacagcctcacggtgctggagcaggcgatcgcgctggaggagcagcggaacccc
ggcgcggcgccggacgtcaccctccgcatcgcggcgctgctgcacgacatcggcaagccg
gcgacgcggcggctggagccgggcggagcggtcagcttctaccaccacgacctcgtcggc
tcgaagctggcgatcaagcggctgcgatcgctgaagttcgacaagcagaccatcgcggac
gtcgcccggctgatcgagctgcacctgcgcttcttcggctacaccgagggcgcctggacc
gactcggccgtccgccgctacgtcaccgacgccggcccgctgctcgagcggctgcacatc
ctgacccgggccgacgtgaccacccgcaacacccgcaaggccgaccggctggcgcacgcc
tacgacgacctggagcagcggatcgcggagctcgccgagaaggaggagctcgcctcgaag
cggcccgacctcgacggcacgcagatcatggcgatcctggatctcccgccggggcgcgag
gtcgggctggcctacaagttcctgctcgagctgcggctcgaggagggaccgctcggcgag
gaggaggccgcccggcggctgaaggagtggtgggcggcgcgctga
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