Pseudorhizobium flavum: RFYW14_00079
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Entry
RFYW14_00079 CDS
T07144
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00550
Peptidoglycan biosynthesis
rfv01100
Metabolic pathways
rfv01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RFYW14_00079
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RFYW14_00079
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rfv01003
]
RFYW14_00079
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfv01011
]
RFYW14_00079
Enzymes [BR:
rfv01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RFYW14_00079
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RFYW14_00079
Glycosyltransferases [BR:
rfv01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RFYW14_00079
Peptidoglycan biosynthesis and degradation proteins [BR:
rfv01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RFYW14_00079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF5923
Motif
Other DBs
NCBI-ProteinID:
CAD6595568
LinkDB
All DBs
Position
1:complement(81691..84054)
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AA seq
787 aa
AA seq
DB search
MRGRCATAGRGRRSGGDRRDMAAKRKSGQRVEPSFDDGEYVDEDFRLRSEDRIAGGGRKR
PSPARKEAPRRPRKGKPTRQSRGFFAPLRSLLYWCLVLGIWVGIGVGGLVLYFGAQMPAA
STWAIPDRPPNIKIVSTDGSVIANRGATGGEALALEEMSPFIPQAVMAIEDRRFYMHFGV
DPLGLTRAFINNVTGQPIQGGSTITQQLAKNLFLSPERTFERKIQEVLLAFWLEHKFSKD
QILAMYLNRVFFGSNAYGVEAASRRYFNKSARDVNLGEAALLAGLLKAPSRLSPARDPEA
AEERAQVVLGAMLEEGYVTEDEIKTAMSQPPTKARSYWSGAEHYAADIVMDEVRKLLGEV
KQDVVVETTIDLSLERKAEEALTDILDDEGGKLNASQAALVSMDATGAIRALVGGKDYAQ
SQFNRAVTAKRQPGSAFKPFVYAAALEAGIRPDSVRNDAPVRIGKWTPENYDQKYRGQVT
VSSALSQSLNTIAAQLVMEVGPDEVVSLAHRMGIEQEMQPNASIALGTSEVPLVELTAAY
APFMNGGYKATPHIVRRILDTDGNVLHESSYDNPPRVLSETIVATMNSMLTRVIQEGTGK
AARLDNWQAAGKTGTTQSFRDAIFVGFTSIMTTGIWFGNDDGTSMKKVTGGGLPARAWKE
YMTAAHAGYSPTPLFGSHGGFALPPAAEPEREPTTIGDIISGVLPGSSAPDDYPAAPSAA
RHDAYPPEGEIPVRDYREYRGPYDGFEDAPMPREGYAEGPIPPGEVGSPSGRGSARQTTL
YDLIMGQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgggcgatgtgcaaccgccggtcgcggccggcgcagcgggggtgaccgacgcgac
atggcggcgaaacgaaaatcgggacagagggtcgagccctcctttgacgacggtgaatat
gtcgacgaggatttccggcttcgttccgaagaccggatagccggcggcggcaggaagcgg
ccgtcgccagcgaggaaggaggcgccgcgccggcctcgcaagggcaaaccgacccggcag
tcccgcggcttttttgcgcctcttcgttcccttctctattggtgccttgttctcggcata
tgggtcgggatcggcgtgggcggcctcgtgctgtacttcggcgcccagatgcccgccgcg
agcacctgggccatcccggaccgtcctccaaacatcaagatcgtctccaccgacggctcc
gtgatcgcaaaccgcggcgccacgggcggcgaagcgctggcgctcgaggagatgtcgccc
ttcatcccgcaggcggtcatggcgatcgaggaccggcgcttctacatgcatttcggggtc
gacccgctggggctgacgcgcgccttcatcaacaatgttaccggccaaccgatccagggc
ggctccaccatcacccagcaacttgccaagaacctgttcctctcccccgaaagaaccttc
gagcggaagatccaggaggtgctgcttgccttctggctggaacacaaattcagcaaggac
cagatcctggcgatgtatctcaaccgggtcttcttcggctcgaacgcctatggagtggag
gcagcgtcgcgacggtacttcaacaagtccgctcgtgacgtgaacctgggcgaggcggca
cttctcgccgggctgctgaaggccccttcccgcctgtctcccgcgcgcgacccggaagcg
gccgaagagcgtgcccaggtggtactcggggctatgctggaggagggctacgtcacggaa
gacgagatcaagaccgccatgtcccagccgcccacaaaggcccgcagctactggtcgggc
gcggaacactacgctgccgacatagtcatggacgaggtcaggaagctgcttggcgaggtg
aagcaggacgtcgtggtcgagacgaccatcgacctctcgctcgaacgcaaggcagaagag
gccctcacggatattcttgacgacgagggcggcaagctcaatgccagccaggcggccctg
gtctcaatggatgccacgggcgccattcgcgcgctggtgggcggcaaggattacgcgcag
agccagttcaaccgcgccgtgaccgccaagcgtcagccgggatccgccttcaagccgttc
gtctatgccgccgcgctcgaagccgggatacggccggactccgtgcgcaacgacgcaccg
gtccggatcggcaagtggacgccggagaactacgaccagaagtaccggggtcaggtgaca
gtttcctcggcgctctcccagtcgctcaacaccattgccgcccaactggtcatggaggtc
ggaccggacgaggtggtgagcctggcgcaccggatggggatagagcaggagatgcagccc
aacgcatccatcgcgctcggcacatcggaagtgccgctcgtggaactaacggccgcctac
gcccccttcatgaacggaggctacaaggcgaccccgcacatcgtgcgccgcatcctcgac
acggacggcaatgttcttcacgagagcagctatgacaacccgccgcgggtgcttagcgag
accatcgtcgccacaatgaacagcatgctcacgcgggtcatccaggaaggcaccggcaag
gcggcgaggctcgacaactggcaggcagccggcaagacgggcaccacccaatccttccgc
gacgcgatcttcgtcggctttaccagcatcatgaccacggggatctggttcggcaacgac
gacggcacctcgatgaaaaaggtgacgggtggcggcctgcctgcaagggcgtggaaggag
tacatgacggccgcccatgcaggctactcgccgacaccgctgttcggcagccatggcggc
ttcgcgctgccaccggctgccgagccggagagggagccgacgacgatcggtgacattata
tccggagtcctccccggatcttctgcgcccgatgactatccggccgcaccctctgctgcg
cgtcacgatgcctatccacccgagggcgaaattcccgtccgcgattatcgcgagtaccgt
ggtccctacgacgggttcgaagatgcacccatgccgcgcgagggttatgctgaaggcccg
ataccacctggcgaagtcggttccccgagcgggaggggatcggcccggcagacaaccctc
tacgacctgatcatgggccagtga
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