Pseudorhizobium flavum: RFYW14_02613
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Entry
RFYW14_02613 CDS
T07144
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfv03021
]
RFYW14_02613
Transcription machinery [BR:
rfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RFYW14_02613
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r3
Sigma70_r4_2
GntR
Snapin_Pallidin
Motif
Other DBs
NCBI-ProteinID:
CAD6613765
LinkDB
All DBs
Position
1:2608510..2609412
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AA seq
300 aa
AA seq
DB search
MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHGDRDAAHQLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRLQAIEEGDLKPDQVAEIATKLNVSEEEVVSMNRRL
SGDASLNAPIRATEGESGQWQDWLVDDQDSQEEVLIEQDELDTRRRMLAKAMGVLNERER
RIFQARRLADDPITLEELSAEFDISRERVRQIEVRAFEKVQEAVQKEALAQANALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatacactgccgtcgattacggccggcgaagccggtctcaatcgctatctc
gatgaaatccgcaagttccccatgcttgagccgcagcaggaatacatgctcgccaagcgg
tacgccgaacatggggatcgcgatgccgcacatcaactggtgacgagccaccttcgcctc
gtggcgaagatcgccatgggctaccgcggatatggcctccccatcggcgaagtcgtctcc
gaaggcaatgtcggcctgatgcaggccgtcaagaaattcgatccggaacgcggcttccgt
cttgccacctacgcgatgtggtggatcaaggcctcgatccaggaatacatcctgcgctca
tggtcgctcgtgaagatgggcaccaccgccaaccagaagcgcctgttcttcaacctgcgc
aggctgaagggccgtctgcaggcgatcgaggaaggcgacctgaagcccgaccaggtagcc
gagatcgccaccaagctgaatgtctccgaggaggaagtggtttccatgaaccgccggctc
tccggtgacgcctccctgaatgcgccgatccgcgcgacggaaggcgaatccggacagtgg
caggattggctcgtggatgaccaggacagccaggaagaagtgctgatcgagcaggacgaa
ctggatacgcgccggcgcatgctcgccaaggcaatgggcgtcctgaacgagcgcgagcgc
cgcatttttcaggccaggcgtctggccgatgatccgatcacactggaagagctctcggca
gaattcgacatcagccgcgagcgcgtccgccagattgaggttcgtgccttcgagaaggtt
caggaagcggttcagaaggaagcactggcccaggccaatgcactgcgtgtcgtcgacgcc
tga
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