Pseudorhizobium flavum: RFYW14_02989
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Entry
RFYW14_02989 CDS
T07144
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RFYW14_02989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_02989
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RFYW14_02989
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Serglycin
Motif
Other DBs
NCBI-ProteinID:
CAD6615872
LinkDB
All DBs
Position
1:2983587..2984480
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AA seq
297 aa
AA seq
DB search
MAPRANWKGYLKVGELSCQVALYTAASTADRVSFNIINRETGHRVHRQLVDADTGKEVAN
EDIVKGYEVASGEYVILEPDEIKDAVPNSDKTLELETFIPCGEVDTIFLDRPYYLAPADK
AAADVYALIRKGLEEKNVAALARTVLFRRLRTLLIRPSDEGLIASTLNYDYEVRAAEEIF
SDIPEFKIEGEMLDLARHIISTKKGEFDPTEFDDRYETALTELIQAKIEGRKLPKKPKPE
PKKVSSLLDALRQSAGSGSGSGSGSGSGSGSGSKKKTTAESKSARKPKTRAPQRKAS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtggcgccgcgtgcaaactggaagggttacttgaaggtcggggagttgagctgccaggtc
gcgctttacacggcggcatcgactgcagaccgcgtcagcttcaacatcataaaccgcgag
accggccaccgcgtccaccgtcagttggttgatgccgataccggcaaggaagtcgccaat
gaggacatcgtcaagggctatgaggtggcgagcggagaatacgtcatactcgaacccgac
gagataaaggatgccgtgccgaacagcgacaaaacgctggaactggaaacgttcatcccc
tgcggagaagtggacacgatcttcctggatcgcccctactacctcgcccctgccgacaag
gccgcagcggatgtctatgcgctgatcaggaaggggctggaggagaagaacgtcgccgcc
ctcgcccgcaccgtcctgttccgccggctgcgaacgctgttgatccgtccgagcgatgag
ggcctcatcgccagcacgctcaactacgactatgaagttcgcgccgccgaggagatcttc
tccgacatcccggagttcaagatcgaaggcgagatgctcgacctcgcccgccacatcatc
tccaccaagaaaggcgaatttgatccgactgagttcgacgaccgctacgagacagcgctc
accgagctcatccaggcgaagatagaaggccgcaagctgccgaagaagccgaagcccgaa
cccaagaaggtctccagcctgcttgacgcgctgcgccagagcgccggctccggctcaggc
tcaggctcaggctcaggctcaggctcaggctcaggctcaaagaagaaaacgacagcggag
agcaagtctgcccgcaagccgaagacccgcgccccgcagaggaaagcgagctga
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