KEGG   Pseudorhizobium flavum: RFYW14_04513
Entry
RFYW14_04513      CDS       T07144                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
rfv  Pseudorhizobium flavum
Pathway
rfv02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rfv00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RFYW14_04513
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rfv02044]
    RFYW14_04513
Secretion system [BR:rfv02044]
 Type IV secretion system
  Trb secretion system protein
   RFYW14_04513
SSDB
Motif
Pfam: VirB8
Other DBs
NCBI-ProteinID: CAD6631458
LinkDB
Position
p4:complement(95711..96388)
AA seq 225 aa
MAGRNPPNNLPVVNPYLAARNEWNERYGSYVKAAAAWRIVGVTGMVMAVIGFGYALYQST
QVKLVPYIVEVDKLGTASNAGFPQQIEYADPRVVRATLGSFVSNFRSVTPDAVVQKQYID
RTYALLRTSDPATEKVNAWFRSSSPFEKAKTATVAVEVNNIVALSNQSYQIDWTEFERDR
RGKETAVRRFRGIATVTLTPPQDEGVIRLNPIGLYLRDFDWTAQL
NT seq 678 nt   +upstreamnt  +downstreamnt
atggccggacgaaatccgccaaataatctccctgtcgtcaatccctatctcgcggcgcgc
aacgaatggaacgagcgctatggctcctatgtgaaggcagccgcagcctggcgtatcgtc
ggcgtcaccggcatggtgatggcggtgatcggctttggctatgcgctttaccagagcacg
caggtgaagctcgttccctatatcgtcgaggtcgacaagctcggcacggcctccaatgcc
ggcttcccgcagcagatcgaatatgccgatccgcgtgtcgtgcgcgcaacgctcggcagc
ttcgtctccaatttccggagcgtgacgccggatgcggtcgtccagaagcaatatatcgat
cggacctatgcgctgctcaggacctcggacccggcgaccgagaaggtcaacgcatggttc
cgctcgagctctccgttcgagaaggcgaagaccgccacggtcgcggtcgaggtcaacaac
atcgtcgcactgtcgaaccagtcgtatcagatcgactggaccgagttcgaacgcgaccgc
cgcggcaaggagaccgccgtccgccgttttcgcggcatcgccaccgtgacactcacaccg
ccgcaggacgagggcgtcatccgtctcaacccgatcggtctctatcttcgcgacttcgac
tggacagcgcagctttga

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