Rhodococcus jostii: RHA1_ro02125
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Entry
RHA1_ro02125 CDS
T00382
Name
(GenBank) possible DNA binding protein
KO
K07110
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
rha
Rhodococcus jostii
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rha03000
]
RHA1_ro02125
Transcription factors [BR:
rha03000
]
Prokaryotic type
Helix-turn-helix
XRE family
RHA1_ro02125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_19
HTH_31
HTH_25
HTH_26
Sigma70_r4
HTH_37
Motif
Other DBs
NCBI-ProteinID:
ABG93932
UniProt:
Q0SEV4
LinkDB
All DBs
Position
2233711..2235123
Genome browser
AA seq
470 aa
AA seq
DB search
MSKTFVGTRLRQLRTERGLSQAALAKTLEISASYLNQIEHDVRPLTVPVLLRISEVFGVD
TTFFSSQDDTRLIAEMREVALDQEMGIDADAQEIAEMVASHPGLAKAMVNMHRRFRNTTA
QLALATEDRYSDGSGSGSITMPHEEVRDYFYQRQNYLHELDTAAEELTARMRFHRGDVGG
EIARRLQTVHDVQIVKRIDLGENVLHRYDPESRLLEISPHLSGGQQVFKFATELAFLEYG
DLLDKLVAEGGFTSDESVALARLGLANYFAAATVLPYGQFHDVAEDFRYDIERLSAFYSV
SYETICHRLSTLQRPKLRGVPFMFVRVDRAGNMSKRQSATGFHFSTSGGTCPLWNVYETF
AYPGKIMNQIAQMPDGRRYLWIARTVERRAQRYGQPAKIFAIGLGCEIRHAHRLVYGDGL
DLDDSNPGTPIGAGCRVCERVNCPQRAFPPLGKQLDISEHQSSVSPYLIR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaccttcgtcggcacccggttgcgtcagctccgaaccgagcgtggactgagc
caggcggcgctggcgaagacgctggagatctccgccagctacctcaatcagatcgagcac
gacgtgcggccactgacggtgccggtgctgctgcggatcagcgaggtgttcggcgtcgac
accacgttcttctcgtcccaggacgacacgcgcctgatcgcggagatgcgcgaggtggcg
ctggatcaggagatgggcatcgacgcggacgcccaggagatcgccgagatggtggcgtcg
catccgggcctggcgaaggcgatggtcaacatgcaccgccgcttccgcaacaccaccgcg
cagctggcgctcgccacggaggaccgctacagcgacggcagcggtagcggctcgatcacg
atgccgcacgaagaggtccgcgactacttctatcagcggcagaactatctgcacgaactg
gacacggcggcggaggaactgaccgcgcgcatgcgattccaccgcggcgacgtcggcggt
gagatcgcccgcaggttgcagaccgtgcacgacgtgcagatcgtcaagcgcatcgacctg
ggcgagaacgtcctgcaccggtacgaccccgaatcccggctgctggagatttcgccgcac
ctgtcgggcggccagcaggtgttcaagttcgcgaccgagctggcgttcctcgaatacggc
gacctgctcgacaagctggtcgcggagggtggcttcacgagcgacgagtccgtcgcgctc
gcccggctcgggctggccaactacttcgctgcggccacggtgctgccgtacggccagttc
cacgacgtggccgaggatttccggtacgacatcgagcggctgtccgcgttctactcggtg
agctacgagacgatctgtcaccgtctctcgacgctgcagcgtccgaagctgcgcggtgtg
ccattcatgttcgtccgtgtcgaccgggccgggaacatgtcgaagcggcagtccgccacg
gggttccacttctccaccagcggcggcacgtgcccactgtggaacgtgtacgagacgttc
gcataccccggcaagatcatgaaccagatcgcacagatgccggacggccgccggtacctg
tggatcgcccggaccgtcgaacgtcgcgcccagcgctacggccagccggccaagatcttc
gcgatcgggctcggctgcgagatccggcacgcccaccgcctcgtctacggcgacggtctc
gacctcgacgattccaacccgggcactccgatcggcgccggttgccgggtgtgcgagcgt
gtcaactgcccgcagcgcgcattcccgccgctcggcaagcaactcgatatcagtgagcac
cagagttcggtctccccgtacctgatccgctga
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