Rhodanobacter denitrificans: R2APBS1_1052
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Entry
R2APBS1_1052 CDS
T02495
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
R2APBS1_1052
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhd01007
]
R2APBS1_1052
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhd03016
]
R2APBS1_1052
Enzymes [BR:
rhd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
R2APBS1_1052
Amino acid related enzymes [BR:
rhd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
R2APBS1_1052
Transfer RNA biogenesis [BR:
rhd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
R2APBS1_1052
Prokaryotic type
R2APBS1_1052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AGG88208
UniProt:
M4NF38
LinkDB
All DBs
Position
1156850..1159228
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AA seq
792 aa
AA seq
DB search
MKFSENWLRELVEIQADRAELAHALTMAGLEVEELTPLGDGLAGVVVARIVAAEKHPEAD
RLQVCKVDAGQGEPLQIVCGAPNARVGINVPLATIGATLPGGIRIKAARLRGVESFGMLC
SAKELGIDTDASGLLELPTDAPVGQPLAGYLGLPDASFELKLTPNRPDCLGLVGLAHDVA
ALFGSTVRLPASATVPVTSNARRGIRLEAGKDAPRYLGRIIEGVDPAARSPLWLAERLRR
AGLRPISAVVDVTNYVMLELGQPLHAFDNDTLEGDIIVRHAHAGETLKLLDGNEAKLDES
FVLIADEKKALAVAGVMGGHDSRVSDATRNVFLESAHFAPAAIMGRARKLGLHTDASHRF
ERGVDPELPRRALERASELLLAIAGGQAGPVLAAENPADLPMPAPVALRRVRLQRVLGVD
VAEAEVARIFTALGMQVATTADGWRVTAPSSRFDIEREEDLIEEVARIFGYDNIPTATPA
GALTLAIEPEARINELALREQLAARGYHEAINLSFVAAELLAGWGFTEHLVPLANPLSAD
LAVMRPSLLPGLVEALRHNRARQQERVRLFEVARVFAEGNPPVETPSLAIVACGAARAEQ
WGEPSRVPDFFDLKGDLDALIAWGGEPWRWSVHADDLPGWLHPGRGARVARDGLTVGYLG
ALHPQLAKALDLGPDVHVLELALEPLLTRRLPRAQAVPRFPAVRRDIAVDLPEAVRWSQI
EQVVRGTLGERLRELRLFDRYRGKGVEAGRKSLAMGLILQDASRTLTDDDADRCVRDAIA
ALEQSCKAKLRG
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttccgagaactggctgcgcgagctggtcgagatccaggccgaccgcgccgag
ctggcccatgcgttgaccatggccgggctggaagtggaagaactcaccccgctgggtgac
ggcctggctggcgtggtggtggccaggatcgtcgccgccgagaagcatcccgaagccgac
cgcctgcaggtatgcaaggttgacgcggggcagggcgagccgctgcagatcgtctgcggc
gcgccgaatgcgcgagtcggcatcaacgtgccgctggccaccatcggcgccaccttgcct
ggcggcatccgcatcaaggcggccaggctgcgcggcgtggagtcgttcggcatgctgtgc
tcggcgaaggagctgggcatcgacaccgacgcctccggcttgctggagttgccgacggat
gcgccagtcggccagccgctggccggctacctcggcctgcccgacgccagcttcgaattg
aagctgacgccgaaccgccccgattgcctgggcctggtcggcctggcccacgacgtggcc
gcgctgttcggcagcacggtgaggctgccggcatcggcgacggtgcccgtgaccagcaac
gcgcgtcgcggcatccgcctggaggcaggcaaggacgcgccgcgctacctcggtcgcatc
atcgaaggcgtggacccggcggcgcgctcgccgctgtggctggccgagcgcctgcgtcgc
gccggcctgcgcccgatcagcgcggtggtcgacgtcaccaactacgtgatgctggagctg
ggccagccgctgcacgcgttcgacaacgacacgctggaaggcgacatcatcgtgcgccac
gcgcacgctggcgaaacgctgaagctgctcgacggcaacgaggcgaagctggacgagagc
ttcgtgctgatcgccgacgagaagaaggcgctggccgtggctggcgtgatgggcggccac
gactcgcgcgtcagcgacgccacgcgcaacgttttcctggaatccgcgcacttcgcgccg
gccgcgatcatgggccgcgcacgcaagctgggcctgcacaccgatgcctcgcaccgcttc
gagcgcggcgtcgaccccgagctgccgcgccgcgccctggagcgcgccagtgagctgctg
ctggcgatcgccggcggccaagccggcccggtgctggcggcagagaacccggccgatctg
ccgatgccggctccggtcgccttgcgccgcgtgcgcctgcagcgcgtgctcggcgtggac
gtggccgaggccgaggtggcgcgcatcttcaccgcgctgggcatgcaggtggcaacgacc
gccgacggctggcgggttaccgcgccgagcagccgtttcgacatcgagcgcgaggaggac
ctgatcgaggaggtcgcgcgcatcttcggctacgacaacatccccaccgcgacgccggcc
ggcgcgctgaccctggcgatcgagccggaggcgcgcatcaacgaactggcgttgcgcgaa
caactggccgcacgcggctatcacgaggcgatcaacctgtcgttcgtggcagcggagttg
ctggcgggctggggtttcaccgagcacctggtgccgctggccaatccgttgtcggccgac
ctggcggtgatgcgaccctcgctgttgccggggctggtcgaggcgctgcgccacaatcgc
gcgcgccagcaagagcgggtgcggctgttcgaggttgcgcgggtatttgctgagggcaac
ccgccggtggaaaccccgagcctggccatcgtggcctgtggcgctgcccgtgccgagcag
tggggcgagccgtcgcgggtgccggatttcttcgatctcaagggcgacctggacgcactg
atcgcctggggcggcgagccctggcgctggtcggtgcatgccgatgacctgccgggctgg
ctgcacccggggcgcggcgcccgggtggcgcgggatggcctcaccgtgggctacctgggc
gcattgcacccgcaattggccaaggcgctcgatctgggcccggacgtgcacgtgctggag
ctggcgctggagccgctgctgacccgtcgcctgccccgggcgcaggcggtaccccggttc
ccggccgtgcgccgcgacatcgcggtggacctgcccgaagcggtccgttggtcacaaatc
gagcaggtggttcgcggcacgctgggcgaacggctgagggaattgcgcctgtttgaccgt
taccgcggcaagggagtcgaagcaggccgaaaaagtctcgctatgggcttgattttgcag
gacgcttcacgcacgcttaccgacgacgacgcggaccgttgcgtacgtgatgcgatagct
gcgttggagcaatcatgcaaggcaaagctgcgagggtga
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