Rhodanobacter denitrificans: R2APBS1_3716
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Entry
R2APBS1_3716 CDS
T02495
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
R2APBS1_3716
Enzymes [BR:
rhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
R2APBS1_3716
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
ResIII
Secretin_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AGG90776
UniProt:
M4NTG0
LinkDB
All DBs
Position
complement(3968343..3970850)
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AA seq
835 aa
AA seq
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MSALPSFPITPLLPEIRASLAATPRLVLEAPPGAGKTTQVPLALLDASWLAGQKIVMLEP
RRIAARAAAQFMAQQLGEDVGQTVGYRIRFESKVSAATRIEVVTEGILARLIQHDPELGG
IGAIVFDEFHERHLAGDLGAALALEVQATLRPQLRLLVMSATLDGERVAAWLDAPRLTSP
GRSYPVRIEYPPARAQETLEQQLARVAKQALEQNDGDVLAFLPGRREIARAQAVLAQVLA
RDDVELVALHGELSLAEQQAALAPAEPGTRRIVLATNVAESSVTAPGIRAVVDSGLAREP
RFDPNSGFTRLQTVNIAQASADQRAGRAGRVAAGTTYRLWPQSRRLDPARSAEIAQAELS
GLALELAAWGSDTLPWLDPPPPGALAQARELLKSLAALDADGRITALGRRMLELGATPRL
GAAALRAPPELHALVADLLALMEARSPLRGMQARSDDFRARVAALHAWRDRRGAAARGEV
DSAALAAIEQASKGWRRRLEVRSAASGVPDSHAVGDLLLHAFPDRIARRDERNPLRYTLA
NGRGARLHEHTALLGEPWLLVLDLRLEARDSLVFAAAPFDPCVLERDYPAQFCRERTLRW
NDERGAAEAFDERRFGAIVLERRSVPVKPADALPALLAAVRAKGLDALPWSEHARRLRAR
MQALRGWMPELGLPDVSEPALLASLEDWLAPHLEGSHRLDALSAEQLAQALASRFDHAQR
RTLDAQAPESLVVPSGQNRRLEYAEGAPPVLAVKLQELFGLADTPRIGGGRIPVTLHLLS
PAGRPIQVTQDLKGFWERTYPEVKKELKGRYPRHPWPDDPWTATPTHRAKPRERN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgctgccttcgttcccgatcaccccgctgctgcccgagatccgcgcgtcgctg
gccgcgacgccgcggctggtgctggaggcgccgccgggcgccggcaagaccacccaggtg
ccgctggccctgctcgatgcgtcgtggctggccgggcagaagatcgtgatgctggagccg
cgccggatcgcggcgcgtgccgccgcacagttcatggcgcagcagctcggcgaggacgtg
ggccagaccgtcggctaccgcatccgcttcgagtcgaaggtgagcgcggcgacccgcatc
gaggtggtcaccgaaggcatccttgcccgcttgatccagcacgatccggagctgggcggg
atcggcgcgatcgtgttcgatgagttccacgaacgccacctcgccggcgacctcggcgcc
gcgctggcgctggaggtgcaggccacgctgcggccgcagctgcgcctgctcgtgatgtcg
gccacgctggacggcgagcgcgtcgcggcgtggctggacgcaccgcggctcacgagtccc
ggccgcagctacccggtgcgcatcgagtatccgccggcgcgcgcgcaggagacgctcgaa
caacagctcgcccgcgtggcgaagcaggcgctggaacagaacgacggcgacgtgctggcg
ttcctgcccggccggcgcgagatcgcgcgcgcgcaggcggtgctggcgcaagtgctggca
cgcgacgacgtcgagctggtcgcactgcacggcgagttgtcgctggccgagcaacaggcc
gcgctggcgccggccgagccgggcacgcgccgcatcgtgctggccaccaacgtggccgag
tccagcgtcacggcgccgggcattcgcgcggtggtcgacagcgggctcgcgcgcgagccg
cgcttcgatccgaactccggcttcacccgcctgcagaccgtaaacatcgcgcaggcctcg
gccgaccagcgcgccggtcgcgcgggacgggtggccgcgggcacgacgtaccggctgtgg
ccgcaaagccggcggctcgacccggcgcgcagcgcggagatcgcgcaggcggaactctcc
gggctggcgctggaactggcggcctggggcagcgataccttgccgtggctggacccgccg
ccgcccggcgcgctggcgcaggcacgcgagctgctgaagagtctcgccgcgctggatgcc
gacggccgcatcactgcgctgggccggcgcatgctggaactcggcgccacgccgcggctc
ggcgccgccgcgctgcgtgcgccgccggaactgcatgcgctggtagccgacctgctggcg
ctgatggaagcgcgttcgccgctgcgcggcatgcaggcgcgcagcgacgatttccgggcg
cgggtggccgccctgcatgcgtggcgcgatcgccgtggtgcagccgcgcgcggcgaggtc
gacagcgctgcgctggccgcgatcgagcaggccagcaagggctggcgccggcgcctggag
gtgcgcagcgccgccagcggcgtgcccgacagccatgcggtcggcgacctgctgctgcac
gccttccccgaccgcatcgcacgccgcgacgagcgcaacccgctgcgctacacgctggcc
aacggtcgtggtgcacgcctgcacgagcacaccgcgctgctgggcgagccgtggctgctg
gtgctggacctgcgcctggaggcgcgcgacagcctggtgttcgccgccgcgccgttcgat
ccgtgcgtgctggaacgcgactatcccgcgcagttctgccgcgagcgcacactgcgctgg
aacgacgagcgcggcgccgccgaggcgttcgacgagcggcgcttcggcgcgatcgtgctg
gagcgccgcagcgtgccggtgaaacccgccgacgcgctgccggcgctgctcgccgccgtg
cgcgcgaagggcctggacgcgctgccgtggagcgagcatgcgcggcggctgcgcgcgcgc
atgcaggcgttgcgtggatggatgcccgagctgggtctgccggatgtgtccgagccggcg
ctgctggcctcgctggaagactggctggccccgcatctcgaaggcagccatcgcctggat
gcgctgagtgcggagcaactggcgcaggcgctggcgtcgcggttcgaccacgcgcagcgc
cgcacgctggatgcgcaggcgccagaaagcctggtggtgcccagcggacagaaccgccgg
ctggagtacgccgaaggtgcgccgccggtgctggcggtgaaactgcaggagctgttcggc
ctggccgacactccccgcatcggcggcggacgcatcccggtcaccctgcacctgctgtcg
ccggccggccggccgatccaggtgacccaggacctgaagggtttctgggaacgcacttac
ccggaagtgaagaaggaactgaagggacgctacccgcgccacccgtggccggacgacccg
tggaccgccacgcccacgcatcgcgcgaaaccgcgcgagcggaactga
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