Ruminiclostridium herbifermentans: EHE19_003355
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Entry
EHE19_003355 CDS
T07161
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EHE19_003355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rher03400
]
EHE19_003355
DNA repair and recombination proteins [BR:
rher03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EHE19_003355
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GFIT
Motif
Pfam:
Ku
DZR
Motif
Other DBs
NCBI-ProteinID:
QNU67567
UniProt:
A0A4U7JHN5
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All DBs
Position
785173..786138
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AA seq
321 aa
AA seq
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MHTVWKGSISFGLVNIPVKMFTATEDKDVRFKYIHKECNTPVKYKKMCPACNKEVQPNDI
VKGYEYEPGKFVILTEEDFASIDTKGEKTVEIMDFVRLEEIDPVYFDKTYYLAPQETGGK
AYTLLREALNGKNRIAVAKITIRERESLAVIRVYNNVLVLETIFYPDEVKDFKEVPGIPE
NVQTTKAELDMASQLIDNLTDVFNPDKYVDTYREKLFEVITAKVEGKNIVEKKETSKDNI
ISLMEALQQSIQMSKGAKQDKGTDSGKVKKAVNSGAKSKRDKVSKASKADKTDETDKTGT
SEADIEKPKAKTRKTKETVKT
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtatggaaaggttcaattagctttggattggtaaatataccagttaaaatg
ttcacagcaacagaagacaaggatgtaaggtttaaatatattcacaaggaatgcaataca
cccgttaagtataaaaaaatgtgtccagcctgtaacaaggaggtgcagcccaatgatata
gttaaaggatatgaatatgaaccaggtaaatttgttatcctgactgaagaagattttgct
tctattgatacaaaaggtgaaaaaacagttgaaataatggattttgttagattagaagaa
attgatccggtttattttgataaaacctattatttagcaccgcaagagacaggtggtaaa
gcatatacactgctaagggaagcgcttaatgggaaaaacagaattgctgttgcaaaaata
actattagagagcgtgaatcactggcagttatcagagtgtacaacaatgttttagttctg
gaaacaatattttatcctgatgaggtcaaggatttcaaggaggttcctggtatccctgaa
aatgtgcaaactacaaaggctgaattagatatggcctcgcagttgattgataatcttact
gatgtattcaacccagataaatatgttgatacttaccgtgaaaagctttttgaagtgatt
acagcaaaggttgagggtaaaaatatcgttgagaaaaaagaaacttcaaaagataatata
ataagtttgatggaggcgttacaacagagtatacaaatgtcaaagggtgctaaacaggat
aaaggcactgattctggtaaggttaaaaaagctgtaaactctggcgcaaaaagtaaaaga
gataaagtatcaaaagcaagtaaagcagataaaacagatgagacagataaaactggtact
agtgaagctgacattgaaaagcctaaagcaaaaactcgaaagacaaaggagacagtgaaa
acatga
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