Rhodoferax sediminis CHu59-6-5: EUB48_03065
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Entry
EUB48_03065 CDS
T06165
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00860
Porphyrin metabolism
rhf01100
Metabolic pathways
rhf01240
Biosynthesis of cofactors
Module
rhf_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
EUB48_03065 (cobD)
Enzymes [BR:
rhf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
EUB48_03065 (cobD)
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Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
QDL36392
UniProt:
A0A515D7K1
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All DBs
Position
complement(642927..643940)
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AA seq
337 aa
AA seq
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MFDGAFDAQGFGWGLALAGGLVLALVLDWAFGEPPARLHPVVWIGRYLGWAGRLIAPSIA
PCAAPRGTHAQPRDFKHFCAGALAWTAGSAIALIASLALETLARRLPLWLAAALLGVALK
PMLAWRMLRDEVLAVEAALGESLAAGRERLAWLVSRDVADLSETGVRESAIETLAENLND
SVLAPIFWFVLLGLPGAAVYRFANTADAMWGYRGERAGRDWEWAGKWAARADDVLSWLPA
RLTALLLALVAGPMSLKTLRREARRTPSPNSGWPMAAMALALRISLRKPGGYALNAAAPP
PQATDTPRAIDIALKVVLAFALIGLSAIVLIAYEVSR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacggcgccttcgatgcgcaggggtttggttggggcctggcgctggccggcggc
ctggtgctggcgctggtgttggactgggcattcggcgagccgccggcccggctgcacccc
gtcgtctggatcggccgctacctcggctgggcaggccgcctcattgcaccgtccatcgca
ccctgcgctgcccctcgcggtacgcacgcgcagccgcgcgatttcaagcatttttgtgcc
ggagcccttgcctggactgcgggttcagctatcgccctgatagcatcgctggccttggag
acgctcgcgcggcgactgcccctgtggctcgccgcggcgctgctgggcgtggcgctcaag
ccaatgctggcctggcgcatgttgcgtgacgaggtgctggcggtcgaggccgcgctgggc
gaatcgctggcggcggggcgcgagcgcctggcctggctggtcagccgcgatgtggcggac
ctgagtgagaccggggtgcgcgagagcgcgatcgaaaccctggctgaaaacctcaacgac
tcggtgctggcgccgatcttctggttcgtgctgctgggcctgcccggtgccgccgtgtac
cgcttcgccaacacggccgacgccatgtggggttaccgcggcgagcgcgccggccgcgac
tgggaatgggccggcaaatgggcggcgcgcgccgacgacgtgctttcctggctcccggcg
cgcttgacggccttgttgctcgcgctggtggccggtcccatgtcgctcaaaacgctgcgc
agggaggcccgtcgcacgccgtcgcccaacagcggctggccgatggcggcgatggcgctg
gcgttgcggatcagcctgcgcaaacccggtggctacgccctgaatgctgccgccccgccg
ccgcaggccacggacacgccgcgcgccatcgatattgcattaaaagtggtactggccttt
gctctgattgggctatcagctattgttttaatagcatacgaggttagccggtga
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