Rhodoferax sediminis CHu59-6-5: EUB48_12880
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Entry
EUB48_12880 CDS
T06165
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhf03000
]
EUB48_12880
Transcription factors [BR:
rhf03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EUB48_12880
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
Peripla_BP_1
HTH_Tnp_ISL3
Peripla_BP_6
HTH_23
HTH_38
CbiX
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDL38078
UniProt:
A0A515DCD4
LinkDB
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Position
complement(2673480..2674544)
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AA seq
354 aa
AA seq
DB search
MSVNPNVMKGVLQRATVADIAKVAKVSTATVDRVLNRRPGVRDATAQRVLKAAAALDYLP
ETGLYAALAAPPMRLTFLLPDGSNRYLRMLGDTVGYSQEHLLPFNVKCRTEQFESFNPQQ
LAASLLRMGQRSDGIAFMALEHPAVREAVSVLAEKGVLTITLISDLTGSRRAGYVGLDNR
AAGRTAGYLVGRFIGPGARSGKVALIAGSRSYSAHEEREAGFLHVIEEMFPALQVVGLRE
GQDDAQKNYEQTRTLLEQHPDLAGIYNIGGASDGVARALKEMGREHKVVFIGHGLTPDTR
AMLIDGSMDAVITQSPQTAMMSCVRMFTNLRDKRDLMSGVDAVRSQVIFRENLP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaacccgaatgtgatgaaaggcgtgctgcagcgagccacggtggccgatatt
gcgaaggtcgccaaggtgtctaccgccaccgtggaccgggtgttgaaccggcgtcccggc
gtgcgtgatgcgacggcccaaagggtattgaaggcggcggcggcactggactacctgccc
gagaccgggctctatgcagcactggctgcgccgcccatgcgcctgacgtttttactgccc
gatggcagcaaccgttatctgcgcatgctgggtgacacggtgggttactcgcaggagcat
ctgttgcccttcaacgtcaagtgccgcaccgagcagtttgaaagcttcaacccacagcaa
ctcgcggccagcctgttgcgcatggggcagcgcagcgacggcatcgccttcatggcgctg
gagcatccggcggtgcgtgaagcggtgagcgtgctggctgaaaagggcgtgttgaccatc
acgctgatttcagacctgacgggctcgcggcgcgccggttatgtgggcctggacaaccgt
gcggcgggacgcaccgccggctacctcgtcggacgtttcatcgggcccggcgcacgcagc
ggcaaggtggcgctgattgccggctcgcgcagctacagcgcgcacgaagagcgcgaggcc
ggttttttgcatgtgatcgaggagatgttcccggcgctgcaggtggtgggcctgcgcgag
ggtcaggacgatgcgcagaaaaattacgagcagacgcgcaccctgctggagcagcacccg
gacctggccggtatctacaacataggcggcgcgtccgacggggtagcgcgcgcgctcaaa
gagatggggcgcgagcacaaagtggtcttcatcggccatggcctcacgcccgacacgcgc
gccatgctgatcgacggcagcatggatgcggtcatcacccaaagcccgcagacagccatg
atgagttgtgtgcgcatgttcacaaacctgcgcgacaagcgtgacctgatgagtggcgtg
gatgccgtgcgcagccaggtgattttcagggaaaacctgccttag
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