Rhodoferax sediminis Gr-4: EXZ61_08085
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Entry
EXZ61_08085 CDS
T06176
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rhg
Rhodoferax sediminis Gr-4
Pathway
rhg00860
Porphyrin metabolism
rhg01100
Metabolic pathways
rhg01240
Biosynthesis of cofactors
Module
rhg_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
EXZ61_08085 (cobD)
Enzymes [BR:
rhg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
EXZ61_08085 (cobD)
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Motif
Pfam:
CobD_Cbib
Phage_holin_3_7
Motif
Other DBs
NCBI-ProteinID:
QDL56725
UniProt:
A0A515EVL5
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Position
1730862..1731923
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AA seq
353 aa
AA seq
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MEFLFLPVLVCGIAVLVALAIDHFWGEPPVNLHPVVWMGNYLAWAGAKVQARTVADPLQR
DLRAFAWGALAWCVGLALVLLVALLAQAGAALLFASLASSKQGPWVPADTHAQSLSWYGA
VLVCGALLGLLLKPLLAWAMLRSEVLAVEDALSGPQGCLESGRQRLSWLVSRDVAALSES
GVRESAIESLAENLNDSVVAPLFWFILAGLPGAAMYRFANTADAMWGYPGVYKGRNWACA
GKWAARVDDVLSYVPARITAWLLALVSGGQTLTVLQAQARRTPSPNSGWPMAAMALGLGV
CLQKPGVYVLNAQGRAPLRQDTLKAIVYARNSVLALVLIAQTAIVLVAFGWVV
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggagtttctgtttcttccggtgttggtgtgcggcatcgctgtgctggtggctttggcc
atagaccatttttggggcgagccgccggtgaatcttcaccccgtggtgtggatgggcaac
tatctggcatgggcgggagcgaaagttcaggcgcgtaccgtggcagaccccttgcagcgt
gacctccgggcgtttgcttggggtgccttggcctggtgcgtgggtttggcattggtgctg
ctggtggccctgttagcccaggcgggcgcggcgctgctgtttgcaagccttgccagcagc
aagcaagggccgtgggttccagcggatacgcatgcgcagagtttgtcttggtatggcgct
gtgcttgtgtgtggtgccttgcttggcctgctgctcaagcccttgctcgcgtgggccatg
ctgcgcagtgaggtcttggctgtggaagatgcgctctcgggcccccaaggctgtttggag
tctggccgccaacgcttgagttggttggtgagccgtgacgtggcggcccttagtgagtcg
ggcgtgcgtgagagtgccattgagtctttggccgaaaacctcaatgactcggtggttgcg
cccttgttttggttcatcttggctggtttgcctggcgcggccatgtaccgctttgccaat
acggcggacgccatgtggggctaccctggggtttacaaagggcgcaactgggcttgcgcg
ggcaagtgggctgcgcgtgtggacgatgtgttgagctatgtgcccgcccgcatcacggct
tggctcttggcgctggtgtctggcgggcaaaccctgacggtgttgcaggcccaagcccgg
cgcacaccctcgcccaacagcggttggcccatggcggccatggccctaggtttgggtgtc
tgtttgcaaaagccgggcgtgtatgtcctgaatgcgcaagggcgagcgccgctgcgccaa
gataccctaaaggccatcgtttatgcgagaaatagcgtgctggcgcttgttctgattgcg
cagacagctatagttttggtagcgtttggatgggtggtttga
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