Sinorhizobium fredii NGR234: NGR_c33410
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Entry
NGR_c33410 CDS
T00888
Name
(GenBank) DNA polymerase III, delta subunit protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03030
DNA replication
rhi03430
Mismatch repair
rhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGR_c33410
03430 Mismatch repair
NGR_c33410
03440 Homologous recombination
NGR_c33410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhi03032
]
NGR_c33410
03400 DNA repair and recombination proteins [BR:
rhi03400
]
NGR_c33410
Enzymes [BR:
rhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NGR_c33410
DNA replication proteins [BR:
rhi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NGR_c33410
DNA repair and recombination proteins [BR:
rhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NGR_c33410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_gamma3
Porphobil_deam
DUF2525
Motif
Other DBs
NCBI-ProteinID:
ACP27071
UniProt:
C3MB62
LinkDB
All DBs
Position
3528459..3529490
Genome browser
AA seq
343 aa
AA seq
DB search
MSEVKSHEFDGFLNRGASNYRLFLLYGPDRGLVSERAAQLAAGCGVALDDPFALVKLDAS
ELQQAGRVLDEVNAIGLFGGEKLVWIRGAASEKAIAEALQILADTPPTGSTLIIEAGDLK
KGAALRKIGETSRAVASIACYSDDARSLQALIDKELAEAGLRIGPAARERLLEALGGDRM
ASRNELRKLALYCRGKDMIDEEDVLAIVGDASAISVDDAVDAVLKGDVDALLHAMKKITS
SKTPPFLVLQACLRQFQQLDVMRAEMDTSRQPANQVVASLGRGLHFRRKPIVEAALKHWT
APAIRRELSRLQATIYQSRARQSLEDSLVLQNLLAIAIQSARR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtcaagtcgcacgaattcgacggcttcctgaatagaggtgcctcgaactac
cgtcttttcctgctctacggtcctgatcgcggcctcgtttcggagcgcgccgcgcagctt
gccgccggctgcggcgtcgctctcgacgacccctttgccttggtcaagcttgatgcctcg
gagctgcagcaggccggccgggtgcttgacgaggtcaacgccattggcctcttcggcggc
gaaaagctcgtctggatccgcggtgctgcgagcgagaaggcgatcgccgaggccttgcag
atcctcgccgatacaccgccaaccggcagcacgcttatcatcgaggcgggcgatctcaag
aagggggccgcgctccggaagatcggcgaaacgtcgcgcgccgtcgcctcgatcgcctgc
tacagcgacgacgcccgcagcctgcaggccttgatcgacaaggagctcgcagaggccggt
ttgcgtataggcccagcggcccgcgagcgtcttctcgaagcgcttggcggcgaccggatg
gcgtcacgcaacgagctcagaaagctggcgctctattgccgcggcaaggatatgatcgac
gaggaggacgtgcttgcgatcgtcggcgacgccagcgccatctccgtcgacgacgcggtc
gatgcagtgctcaagggcgacgtcgatgccctgctgcacgccatgaagaagatcaccagc
tcgaagacgccgcccttccttgtgctccaggcctgtctgaggcagttccagcagctggat
gtgatgcgcgccgaaatggacaccagccgccagccggcgaaccaagtggtcgcaagcctc
ggccgcggcctgcatttccgccgcaagccgatcgtcgaggcggcgctcaagcactggacg
gccccggcgatccggcgcgaactgagccggctccaggccacgatataccagagccgggcc
cgccagagcctggaagacagtctggtgctgcaaaacctgctagcgatcgcgattcagtcg
gcaaggcgctga
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