Rhizobium hidalgonense: FFM81_004905
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Entry
FFM81_004905 CDS
T07043
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhid
Rhizobium hidalgonense
Pathway
rhid03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FFM81_004905 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhid03400
]
FFM81_004905 (ung)
Enzymes [BR:
rhid01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FFM81_004905 (ung)
DNA repair and recombination proteins [BR:
rhid03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FFM81_004905 (ung)
Prokaryotic type
FFM81_004905 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QKK22732
LinkDB
All DBs
Position
1046131..1046850
Genome browser
AA seq
239 aa
AA seq
DB search
MSDTSVSLEESWKAALAGEFSSPYMQQLKSFLVAQKQVGKRIFPRGSEYFRALDLTPISS
VKVVILGQDPYHGLGQAHGLCFSVRPGVRIPPSLVNIYKEMQTDLGIAPARHGFLEHWAR
QGVLLLNSVLTVEEGQAAAHQGKGWEKFTDAVIRKINDECESVVFMLWGSYAQRKAAFVD
TTRHLVLRAPHPSPLSAHSGFFGCRHFSKANDFLQSRGRSPIDWQLPADPQEHPVVNAC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacatcagtcagtctcgaagagagctggaaagccgctctggcgggtgagttc
tcaagcccctatatgcagcagcttaaatcctttcttgtcgcgcagaagcaggtcggtaag
cggattttcccccgaggcagtgaatatttccgcgccctcgacctgacgccgatctccagc
gtcaaggtcgtcattctcggtcaggatccctatcacgggttggggcaggcccacgggctg
tgcttcagcgtgcgaccgggcgtgcgcatcccgccctccctcgtcaatatctataaggaa
atgcagacggatcttggcatagcgccggcgcgtcacggttttctcgaacattgggcaaga
cagggcgtgctgctgctgaacagcgtgctgacggtcgaggagggccaagcggcggctcat
cagggcaaggggtgggagaagttcaccgacgcggtcatccgcaaaatcaacgacgagtgc
gaatccgtcgtcttcatgctctggggctcctatgcccagcgcaaggccgcctttgtcgat
acgacgcgacatctcgtgctcagggcgccacatccctcgccgctttcggcccatagcggg
tttttcggttgccggcatttttcgaaggcgaatgattttctgcagtcgcgcgggcggtcg
ccaatcgactggcaattgccggccgatccccaagaacatccagttgtgaacgcctgttaa
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