Rhizobium sp. Kim5: Kim5_CH03314
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Entry
Kim5_CH03314 CDS
T05501
Name
(GenBank) poly(A) polymerase domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kim5_CH03314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhk03019
]
Kim5_CH03314
Enzymes [BR:
rhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Kim5_CH03314
Messenger RNA biogenesis [BR:
rhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Kim5_CH03314
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ARQ59340
LinkDB
All DBs
Position
complement(3318456..3319721)
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AA seq
421 aa
AA seq
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MTGLADQAWFRDPALGRILALLNDDDGADNGEARVVGGAVRNSLMGLPVSDIDIATTLTP
EIVIERAMAAGIKAVPTGLQHGTVTLVIDGKPFEVTTLRTDVETDGRHAKVAFSTDWKAD
AERRDLTINALYADARGEVVDLVGGLADIETRNIRFIGDAAKRIAEDHLRILRFFRFFAY
YGSGRPDAEGLRACAAARSKLKTLSAERVWSELRKLLGAADPGRALLWMRQVAVLTEILP
ESERWGIDAIPSLVATEKALGWAPDPLLRLAAIVPPDAARLEALAARLKLSNAEAATLKA
WAMTAPVNDEMSSAAFEQLLYRNGAEGIMTRLKLALGVARGKAEGDLGEMARSARLGKLL
DRAMKWKKPQFPVNGADVIAAGIPSGPRVGELLGSLENQWVDENFASDRAALLARLRERL
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgaccggccttgccgaccaagcatggttccgcgacccggcgctcggccggatccttgcg
cttctcaacgacgatgatggggccgataacggggaagctcgggttgtgggcggggcggtg
cgcaacagcctgatgggcctgccggtcagcgatatcgatatcgccacgacgctgacgccc
gagatcgtgatcgagcgggcaatggccgccggtatcaaggcggtgccgaccggcctgcag
cacggcacggtgacgcttgtcatcgacggcaagcccttcgaggtgacgacgcttcgaacc
gacgtcgagaccgatgggcgccatgccaaagtcgctttcagcaccgactggaaggccgat
gccgagcggcgggatctgacgatcaacgcgctctatgccgatgcgagaggcgaggtggtc
gatctcgtcggcgggcttgcagatatagaaacgcgcaacatccgcttcatcggcgatgcg
gcaaagcgtatcgccgaggaccatctgcgcattctgcgcttcttccgtttctttgcctat
tacggttccgggcgcccggatgccgaaggtctgagggcctgcgcggcggcgcgttcgaaa
ctgaagacgctgtcggccgaacgcgtctggtcggagctcagaaaactgcttggcgccgcc
gatcccggccgagcgctgctctggatgcggcaggtggcggtgctgacggagatcctgccg
gaatcggaacgatgggggatcgatgcaatcccttcgctggtcgccaccgaaaaggcgctc
ggctgggcgcccgatccgctgctgcggcttgccgcgatcgtgccgcccgacgcggcgcgg
ctggaggcgcttgcggcccggctgaagctctcgaatgctgaagctgccactctcaaggcc
tgggcgatgacggcaccggtcaacgacgaaatgtcgtcggccgccttcgagcagctgctt
taccgcaacggtgcggaaggcatcatgacgcgcctgaagctggcgcttggcgtcgcacgg
gggaaggccgagggcgacctcggcgagatggcgcgctcggcgcggctcggcaagctccta
gatcgggccatgaaatggaaaaagccgcagtttccggtgaatggcgcagacgtgatcgcg
gcgggcatcccatcgggcccgcgcgttggcgaactgcttggcagcttggaaaatcagtgg
gtggatgagaatttcgcttccgatcgagcagcactgctcgcgaggttgcgggaacgcttg
caatag
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