Rhizobium sp. Kim5: Kim5_CH03395
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Entry
Kim5_CH03395 CDS
T05501
Symbol
gcvA-2
Name
(GenBank) glycine-cleavage system transcriptional activator GcvA 2
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhk03000
]
Kim5_CH03395 (gcvA-2)
Transcription factors [BR:
rhk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Kim5_CH03395 (gcvA-2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ARQ59419
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Position
3403240..3404136
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AA seq
298 aa
AA seq
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MKLSKQFPLNALRVFEAAARLGSITKAGDELGMTQTAVSYQIKLLEENVGEPLFLRRPRQ
IALTETGERLAPKVTEAFAMLHDAMATARDSVEGTLAISSTHTFASKWLAPRLGSFHLKH
PAIAVRFQASSDIIDFSREQIDVAIRWGDGNWPGLTLHRLMGLEFTPMLSPKLAEAAGGI
REPRDLLKFDLFDAGDIWWKQWFEAAGVTETDLDRRPRNQLGSQAVEADAAMSGHGVAIL
NPAFYAAEIALGRLYQPFELTRSDGKAYWLAYPENRRNLPKIKAFRNWILEEMKAAGH
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttcgaaacagtttccgctgaatgcgctgcgcgtcttcgaggccgccgcccgg
ctcggtagtatcaccaaggccggcgacgagctcggcatgacgcagacggccgtcagctac
cagatcaagctcttggaggagaatgtcggcgagccgctcttcctgcgccggccccgacag
atcgcattgacggagaccggcgaacggctggcgccgaaggtgaccgaagccttcgccatg
ctgcacgacgcgatggcgacggcgcgcgacagtgtcgaaggcacgctcgccatcagctct
acccatacgttcgcgtcaaaatggctggcgccgcgcctcggctccttccatttgaagcat
ccggcgatcgccgtgcgctttcaggcgagctctgatatcatcgacttttctcgcgagcag
atcgatgtcgccatccgctggggcgacggcaattggccgggtctgaccctgcaccggctg
atggggctggagttcacaccgatgctgagcccgaagctggcggaagcggccggcggcatc
agggagccgcgtgatctcctgaaattcgatctcttcgatgccggtgacatctggtggaaa
caatggttcgaggcagccggcgtcaccgagacggatcttgatcgccgcccgcgcaatcaa
ctcggctcccaggcggtggaagccgacgcggcaatgtcgggacatggcgtcgccatcctc
aacccggccttctatgcggccgaaatcgcgctcggccggctctatcagcccttcgagttg
acccgcagcgacggcaaggcttactggcttgcctatcccgaaaaccgccgtaacctaccg
aagatcaaggccttccgcaactggatcctggaagagatgaaggcggccggccattag
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