Rhizobium sp. Kim5: Kim5_PD00165
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Entry
Kim5_PD00165 CDS
T05501
Symbol
degP-6
Name
(GenBank) serine protease Do 6
Organism
rhk
Rhizobium sp. Kim5
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Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_6
PDZ_2
PDZ
Trypsin
Tricorn_PDZ
LSM
Motif
Other DBs
NCBI-ProteinID:
ARQ62173
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Position
pRetKim5d:complement(171131..172516)
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AA seq
461 aa
AA seq
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MSDLTPRFHGIVAPLAFALGAILITVTPATPETAGSSAAPSSSLPTLAPMLEQVTPGVVN
IAVVSKAPAEDNPLYSDPAFRRFFGVPEQQQRARMSAGSGVIVDAAKGYVLTNHHVVDGG
TEISVTLKDGRRFSAKLIGSDKETDLALLQIDAHNLTAIQIGDSDALKVGDYVVAIGNPF
GLGQTVTSGIVSALGRSGLNIEGYEDFIQTDASINPGNSGGALVTLEGKLIGINTAILSP
AGANVGIGFAVPSNMAASVMDQLANHGKVERGKLGIGIQDLTPDLAEALRLGDLRGALIA
NIEPGSAAERAGLKTGDVVTAIDGRPVHGSTDLRNRIGLTPAGSKVSLTVKRGDDEQIIA
VTIEAEEKALPDVSGTPLEGARMRDASSAGSQIGGSGVVIESLASGSAAARAGLRPGDII
VAVNRVPVASVADLRRTIAERPAIVALELIRDGGRLLLVIR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatctcaccccgaggttccacgggattgtagccccacttgcttttgcccttggc
gccattttgataaccgtcacgccggccacaccggagacggcgggatcatcggcggctcct
tcctccagcttgccgacgctggcccccatgcttgaacaagtcaccccgggtgtggtcaac
atcgcagtcgtttcaaaggcgccggcagaagacaaccctctttacagcgatccagctttc
aggcgcttctttggtgtgccagagcagcaacagagagccagaatgagcgccggctccggc
gtgatcgtcgacgccgcaaaaggttatgtgctcaccaaccaccatgtcgtcgacggggga
actgagatctccgtcacactcaaagacggccggcggttctctgcaaaactgatcggtagc
gacaaggagaccgatctcgccctgctccagatcgacgctcacaatcttacggctatccag
atcggagattccgatgcccttaaggtgggggactacgtcgtcgccatcgggaacccgttc
ggacttgggcaaaccgtgacctcgggtatcgtcagcgccttggggcgaagcggtctgaac
atcgaaggctatgaagactttatccagaccgatgcctcaatcaacccgggcaattccggc
ggcgcgctggtcacactcgagggcaagctgatcggtatcaacaccgcgattctcagcccc
gccggagccaatgtcggtataggctttgcggtaccgagcaacatggcggcttcagtcatg
gaccagttggccaaccatggaaaggtggagcgcggcaagctcggcatcggcatccaggat
cttacgccggacttggctgaagctctcagacttggcgacctgcgcggcgcgcttatcgcg
aatatcgaaccgggttctgcggccgaacgcgccgggctgaagaccggagacgtggtaaca
gcaatcgacggacgtcccgtccatggctcaaccgaccttagaaaccgcatcgggctcacg
cccgcaggcagcaaggtcagtctgactgtgaaacgcggcgatgacgagcagataatcgcc
gtcacgatcgaagccgaggagaaggcgttgccagacgtctccggcacgcccctcgaaggg
gccaggatgagagatgcatccagcgccggatctcagattggaggctccggcgtggtgatc
gagagccttgcgtctgggagcgcggccgctcgcgccggccttcgacccggcgatatcatc
gttgcggtgaacagggttccagttgcttccgtcgccgacctacgacggacaatcgccgag
agaccagccatcgtggcgcttgaattgatccgcgatggcggtcgcttgctgttggtcatc
cggtga
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