Rhizobium favelukesii: LPU83_pLPU83c0469
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Entry
LPU83_pLPU83c0469 CDS
T03046
Symbol
dppA
Name
(GenBank) Periplasmic dipeptide transport protein Dipeptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhl
Rhizobium favelukesii
Pathway
rhl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPU83_pLPU83c0469 (dppA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhl02000
]
LPU83_pLPU83c0469 (dppA)
Transporters [BR:
rhl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LPU83_pLPU83c0469 (dppA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
LinkDB
All DBs
Position
pLPU83c:431502..433010
Genome browser
AA seq
502 aa
AA seq
DB search
MTIRYSTGAAALLCAVLLSGAAYAVEGEVKIVLPEQPANLDPCRSIRSDIGRIINSNITE
TLTVIEPEKGTVAPWLADKWERVNDLTWRVHLKSGVKFQDGAEFNADAVVKSINRLMNPK
LTCDSRSKFGDVKLTPKAVDAQTVEIVSDSPVPIMPTLLGTVQIVSPNMPFDKESNKPVG
TGPYVVESASTEEIVLKRDDGYWGAKPDVTRATYVWRNESAIRAAMIESAEADLTPSIAV
QDATNPQTDFAYLNSETTRMRIDAQIPPLDDVRIRKALNMAIDWDGMGEALFGKDVLRAS
QMVVPGVRGHNPDIKAWTYNPDEAKKLVEEAKAAGAPVDKEIVLIGRNGFFPNSSESLEA
MRSMWQEIGLNVSIRQLEAADWVRYLDKPFPEGRGPTLFQQQHDNNTGDAGFTAPVMYLS
DGQYSTIADKDLDARLKKAMAATGDDREKLFQSVFAKVHDEIVADVPMYHMIGYVRVGPR
LDWKPDLKTNSEIALSEIHFKN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgttattccactggcgcagcagcgctgctttgcgcagttttgctttccggt
gcggcgtatgcagttgagggcgaggttaagatcgtgctgccggagcagccggcaaacctc
gatccctgccgatcgatccgctccgacatcggccgcatcatcaattccaacatcacggaa
acgctgacagtcatcgagcctgaaaagggaacggtcgcgccttggctcgccgataagtgg
gaacgggtcaacgatctgacgtggcgtgtccatctgaagagtggcgtcaagttccaggac
ggtgccgaattcaatgccgacgccgtcgtcaagtccattaaccgtctcatgaatccgaaa
ctcacgtgtgacagccgctcgaagttcggcgacgtcaagctgacgcccaaggccgtcgat
gcgcagaccgtcgagatcgtctccgacagcccggttccaatcatgccgacattgcttggc
acggtgcagatcgtctcgccgaacatgccctttgacaaggaaagtaacaagccagtcggg
accggtccctatgtcgttgaaagcgcatcgaccgaggagatcgtgctgaaacgcgatgac
ggctattggggcgccaaaccggacgtgacgcgtgccacctatgtgtggcgcaacgagtcg
gcaatccgcgccgcgatgatcgaatcggccgaggcagaccttaccccgtcgatcgcggta
caggacgccaccaatccgcagaccgatttcgcatacctcaattccgaaacgacgcgcatg
cgcatcgatgcgcagattccgccgctggacgacgtgcgcatccgcaaggcactcaacatg
gccatcgactgggatggtatgggcgaggcgctgttcggcaaggacgtactgcgtgcctcg
cagatggtcgtaccgggcgtgcgcggccacaatcccgacatcaaggcctggacctacaat
cccgatgaggcgaagaagctggtcgaagaggcgaaggcggccggcgctcccgtcgacaaa
gagatcgtgctcatcggccgaaacggcttcttccccaactcctcggaaagcctcgaagca
atgcgctcgatgtggcaagagatcggcctcaatgtctcgatccgccagctcgaggccgcc
gactgggtccgctacctcgacaagccgttcccggaaggccgtggcccgacactgttccag
cagcagcatgacaacaatacgggcgatgccggcttcacggcacctgtcatgtatctgagc
gacggccagtattcgacgatcgccgacaaggatcttgacgccagactgaagaaggcgatg
gccgcgaccggcgacgatcgtgaaaagctcttccagagcgtatttgccaaggtccacgac
gagatcgtcgccgacgtaccgatgtatcatatgatcggttatgtccgtgtcgggccgcgc
ctcgactggaaacccgatctgaagacgaacagcgagatcgcgctcagcgaaatccacttc
aagaactga
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