Rhodovulum sp. MB263: B5V46_00310
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Entry
B5V46_00310 CDS
T04771
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhm
Rhodovulum sp. MB263
Brite
KEGG Orthology (KO) [BR:
rhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhm03400
]
B5V46_00310
Enzymes [BR:
rhm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B5V46_00310
DNA repair and recombination proteins [BR:
rhm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B5V46_00310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
AvrRpt-cleavage
Motif
Other DBs
NCBI-ProteinID:
ARC87185
UniProt:
A0A1V0HTB7
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All DBs
Position
48203..51142
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AA seq
979 aa
AA seq
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MFEGPAPRLFGLPPGADFPRELLIGLEQRLSGAPPEAWAEVEIWVNTERMRRRIVDLFQA
GPPRLLPRIRLVTDLARHPILADLPAPVSPLRRRLELGQLVRALLDRAPDLAARGSAFDL
ADSLAALLDEMQAEGVPPRVLHDLDVGNLSAHWARARQFVTLVETWLGPDLSGRPGGGAR
QRLAVERLTERWRADPPRHPVIVAGTTGSRGATALFLREAARLPQGAAVLPGYDFDMPAA
IWDGLDDALAAEDHPQYRFRRILNDSGLGPGDVQPWRAEAGPPNPPRTRLISLALRPAPV
TDQWMEDGPRLTGLDRATEALTLIEAPSPRAEALAIALRLRRAAEDGQSAALVSPDRTLT
RQVTAALDRWGIRPDDSAGTPLPLSPPGRFLRQVAALFGRALTVETLLSLLKHPLTASSP
GLRANHLRWTRELELHLRRHGPAFPDGPALTGWAEGHEDGREAWAAWLAEALEGPDRAGT
EPLCAHVARHRQLAETLAAGPDAEGSGALWLEEAGLQARAALDLLEAEADAGGEMTPADF
SALLDSVLRDGSVRSAVAPHPGVMIWGTLEARVQGADLVILAGLNEGIWPETPPPDPWLN
RQMRAEAGLLLPERQIGLAAHDFQQAICAPEVVISRAIRTAEAQTVPARWLNRLTNLMEG
LGSTGGPEALAAMRARGKGWLAMAQALDRPTAPLPAAHRPSPRPPVEQRPERLSVTAIER
LIRDPYAVYARHILRLKRLDPLVRSADAPLRGTVLHKVMERFLDRPIDPDPARARADLMA
IADEVLATDAPWPAARALWRARLGRAAESFLRDEARRQAEAACIAREHPGAARLESGFTL
TAQADRIDRRPDGRLIVYDYKTGTPPSLKAMEAFDKQLLLEACIAERGGFEEIPAAPVDH
VTYIGLGQPPKTVTNSLDDGLVARSWAELGRLIDRYARPEQGYTARNRVQKRSDITDYDL
LSRFGEWDETDPPKPEDVG
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaggaccggcgccccgcctgttcggcctgccgcccggcgccgatttcccgcgc
gagctgctgatcgggctggaacagagactgtccggcgcccctcccgaggcctgggccgag
gtcgagatctgggtcaataccgagcggatgcggcgccggatcgtcgatctgttccaggcc
gggccgccgcgccttctgccccgcatccggctggtgaccgaccttgcgcgccatccgatc
ctcgcggatcttccggcaccggtctcgccgctcagacggcggctggaactggggcaactg
gtgcgggcgctgctcgaccgcgcccccgatctggccgcgcgcggctcggccttcgatctg
gccgacagccttgccgccctgcttgatgagatgcaggccgagggcgtgccgccgcgggtg
ctgcacgatctcgatgtcggtaacctctcggcgcattgggcccgggcccggcaattcgtg
acgctggtcgagacctggctcggccccgacctgtcggggcgtcccggcggcggcgccagg
cagcgcctcgcggtcgagcggctgaccgagcgctggcgcgccgatccgccccgccatccg
gtgatcgtcgcgggcaccaccggctcgcgcggggcaacagcgctgttcctgcgcgaggcc
gcccggctgccgcagggcgccgcagtcctgcccggctatgatttcgacatgcccgccgcg
atctgggacgggctcgacgatgcgctggcggccgaggaccacccgcaataccgcttccgc
cgtatcctcaacgacagcgggcttgggccgggcgatgtgcagccatggcgcgccgaggcc
ggacctccgaacccgccgcgcacccggctgatctcgctcgcgctccggcccgccccggtc
accgatcagtggatggaggacgggccccgtctgaccgggctcgaccgcgcaacagaggcg
ctgacgctgatcgaggcgccctcgccgcgggccgaggcgctggccatcgcgctgcggctg
cgccgtgccgccgaggacgggcaaagcgctgcgctggtcagccccgaccggaccctgacc
cgccaggtcaccgccgcgctcgaccgctggggcatccggcccgatgacagcgccggcacc
ccgctgccgctgtcgccgccgggccggttcctgcgtcaggtcgcggcgctgttcggccgg
gcgctgacggtcgagaccctgctgtcgctgctcaagcacccgctgaccgcctcgagccca
ggcctgcgcgccaatcacctgcgctggacccgcgagcttgaactgcatctgcggcggcac
ggacccgcctttcccgacggcccggccctgacaggctgggccgaaggccacgaagatggc
cgcgaggcctgggccgcctggctagccgaggctctggagggaccggatcgggccggaaca
gagccgctttgcgcccatgtcgcgcggcaccgtcagttggccgaaaccctcgccgccggg
ccggacgccgagggcagcggcgcgctctggctggaagaggccggcctgcaggcgcgggcc
gcgctcgacctgctcgaggccgaggcagatgcgggcggcgagatgaccccggccgatttc
tcggccctgctcgactcggtcctgcgcgacggttcggtccgcagcgcggtcgcaccgcat
ccgggggtgatgatttggggcacgctcgaggcccgcgtccagggcgccgacctggtgatc
ctcgccgggctgaacgaaggcatctggcccgagaccccgccgcccgatccctggctgaac
cggcagatgcgggccgaggcgggcctgttgctgccggaacgtcagataggactggccgcg
catgacttccagcaggcgatctgcgcccccgaggtggtgatctcgcgcgcgatccgcacc
gccgaggcccagaccgtgcccgcgcgctggctgaaccggctgaccaacctgatggagggg
ctgggcagcactggcggccccgaggcgctggccgcgatgcgggcgcgggggaaaggctgg
cttgcgatggcgcaggcgctcgaccggccaaccgcaccactgcccgccgcgcaccgcccc
tcgccccggccccccgtcgagcagcgtcccgagcggctgtcggtaacggcgatcgagcgg
ctgatccgcgacccctatgccgtctatgcccgccatatcctgcggctgaagcgtctcgac
ccgctggtgcgcagcgccgatgcgccgctgcggggcaccgtcctgcacaaggtgatggag
cggtttctggaccggcccatcgaccccgatccggcccgcgcccgggccgatctgatggcc
atcgccgatgaggttcttgcgaccgacgcgccctggcccgccgcccgcgcgctctggcgg
gcgcggctcggacgcgcggccgaaagcttcctgcgcgacgaggcgcgacgtcaggccgag
gccgcctgcatcgcccgcgaacacccgggcgcggcacggctggaaagcggcttcaccctc
accgcgcaggccgaccggatcgaccgccgtcccgatggccgcctgatcgtctatgattac
aagaccggcacgccgcccagcctgaaggcgatggaggccttcgacaagcagctgctgctg
gaggcctgcatcgccgaacgcggcggcttcgaggagatcccggccgcgcccgtcgatcac
gtcacctatatcggcctcggccagccgccgaagaccgtgaccaacagcctggatgacggt
ctggtcgcgcgcagctgggccgagcttgggcggctgatcgaccgctatgcccgtcccgaa
cagggctataccgcccgcaaccgggtccagaaacgcagcgacatcaccgattacgatctg
ctgtcgcgctttggcgaatgggacgagaccgatccgccaaaaccggaggatgtgggatga
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