Rhizobium sp. N1341: AMJ98_CH01549
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Entry
AMJ98_CH01549 CDS
T04420
Name
(GenBank) L,D-transpeptidase domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhn01002
]
AMJ98_CH01549
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhn01011
]
AMJ98_CH01549
Peptidases and inhibitors [BR:
rhn01002
]
Cysteine peptidases
Family C82
AMJ98_CH01549
Peptidoglycan biosynthesis and degradation proteins [BR:
rhn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AMJ98_CH01549
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PsbQ
Motif
Other DBs
NCBI-ProteinID:
ANL09255
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All DBs
Position
1571801..1573183
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AA seq
460 aa
AA seq
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MDRDLRYGAVISQSAALPCMRHSVVGTMSKKNGNEALSRRAFLASAATIGASAMAAPALA
QSALDTLINAPRRGNWDDQFDAKAASRTATAVVSNTPILGPQSVASAQQAIMQYQQIAAA
GGWPEVNPGDQRLQLGVSSPAVQALRQRLAITGDLPREAGMSNAFDSYVDGAVKRFQARH
GLPSDGVLGEFTLKAMNIPADVRLQQLNTNLVRLQTFPEDLGRRHLMVNIPAAYVEAVED
GSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNA
IRLIDGKGNEVSPETVDWNGEAPNLMFRQDPGKINAMASTKINFYNKNGEYMHDTPQQGL
FNKLMRFESSGCVRVQNVRDLSTWLLRETPGWSRQQMEQVIASGVNTPIKLATEVPVYFV
YISAWGMPDGIVQFRDDIYQMDGNAELALDTTAGMEQPVQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggatagggatctgcgttacggcgcagtgatatcgcaaagcgccgcgcttccttgcatg
cggcattcagtggttgggactatgtcgaagaaaaacggaaatgaagctctctcgcgccgc
gctttccttgcgtccgcggcaacgattggcgccagcgcgatggccgcgccggcattggcg
cagtcggcgctcgatacgctgatcaacgcgccgcgccgcggcaactgggacgaccagttc
gatgccaaggcggcttcgcgcacggcgaccgccgtcgtttccaacacgccgatcctcggt
ccccagtcggtcgccagtgcccagcaggcgatcatgcagtatcagcagattgcggccgcc
ggcggctggcccgaagtcaatcccggtgatcagcgcctgcagctcggcgtttcctctccc
gccgtccaggcgttgcgccagcgccttgcgatcaccggcgacctgccgcgcgaggcaggc
atgtcgaacgccttcgattcttatgtcgacggcgccgtcaagcgcttccaggcgcgtcac
ggcctgccgtccgacggcgttctcggcgagttcacgctgaaggcgatgaacattccggcc
gatgtccgcctgcagcagctcaacaccaacctggtccgcctgcagaccttcccggaagat
ctcggccgccgccatctgatggtcaacattccggccgcctatgtcgaggctgtcgaagac
ggcagcgttgccacccgccacaccgcggttgtcggccgtctgagccgcccgacgcatctc
gtcaactcgaagatctacgaagtcatcctcaacccatactggaccgcgccgcgctcgatc
gtcgaaaaggacatcatgccgctgatgcgcaaggatccgacctatctggaaaagaacgcg
atccgcctgatcgacggcaagggcaacgaggtttctccggagactgtcgactggaacggc
gaggcgccgaacctgatgttccgccaggacccgggcaagatcaacgccatggcgtcgacg
aagatcaacttctacaacaagaacggcgaatacatgcacgacacgccgcagcagggcctg
ttcaacaagctcatgcgtttcgagtcgtcgggctgcgtccgcgttcagaacgtgcgcgac
ctgtcgacctggctgttgcgcgagacgccgggctggagccgccagcagatggagcaggtg
atcgcaagcggcgtcaacacgccaatcaagctcgccaccgaagttccggtctatttcgtc
tacatctccgcctggggcatgcccgacggcatcgtccagttccgcgacgacatctatcag
atggatggcaatgccgagctcgcgctcgacaccacggccggcatggaacagccggtgcaa
taa
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