Rhizobium sp. N1341: AMJ98_CH03272
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Entry
AMJ98_CH03272 CDS
T04420
Name
(GenBank) RNA polymerase sigma factor protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rhn
Rhizobium sp. N1341
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhn03021
]
AMJ98_CH03272
Transcription machinery [BR:
rhn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMJ98_CH03272
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_9
Sigma70_r4
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ANL10898
LinkDB
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Position
complement(3304601..3305860)
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AA seq
419 aa
AA seq
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MTDIAWIDLALASARPKALGALLRYFRDLDTAEEAFQEACLRAIRTWPEKGPPRDPTAWL
IFVGRNSGIDAVRKRSKLQALPDEDVISDTEDTESDIVERLDDSNYRDDILRLLFICCHP
DLPATQQIALALRIVSGLSVTQIARAFLVSESAMEQRITRAKARVAKAGVPFETPSPEER
AERLSIVSTMIYLIFNEGYSQADPRHEAAAFSDEAIRLGRLMLHIFPSEPELMGLLALML
LQISRRPARFSAEGEIVLLEDQDRSLWNQLFINEALALLDKALRHRQPGPYQLQAAIAAI
HSRAKRAEDTDWVEIDLLYRALERVQPSPVVTLNRAVVVSKLRGPQEALDLIDPLGEKLG
GYFYYHGLRGGLLKQLGLTSQAREAFDHAIALAHSAAEAAHIRRQIDKMQEEAAQPIAN
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacattgcctggatcgacctcgcgcttgcctctgcccgcccgaaggcgctcggc
gcgctgttgcgctatttccgcgatctcgataccgcggaagaggcgttccaggaggcatgc
ctcagggcgatccggacatggccggaaaagggaccgccgcgcgatccgacggcctggctc
attttcgtcggtcgcaacagcggtatcgatgcggtgcgcaaacggtcgaagcttcaggcg
ctgccggatgaggacgtcatttccgatactgaggataccgaaagcgacattgtcgagcgg
ctggatgattccaattatcgcgacgatatcctgcggcttctcttcatctgctgccatccc
gatctgccggcgacccagcagatcgcgctggcgctgcgcatcgtgtccggcctttcggtg
acgcagatcgcgcgcgcattcctggtctccgaaagcgccatggagcaacgcatcacccgg
gccaaggcgcgcgtcgccaaggccggcgtgcctttcgaaacgccaagccctgaggagagg
gccgagcgtctctcgatcgtcagcacgatgatctatctcatcttcaacgagggctacagc
caggccgatcccaggcatgaggcggccgccttcagcgatgaggcgatccggctgggacgc
ctgatgctgcacatctttccgtccgaaccggagttgatggggttgcttgcgctcatgctt
ctgcagatatcgcgccgcccggcgcgcttcagcgccgaaggcgagatcgtgctgctcgag
gatcaggaccgctctctctggaaccagcttttcatcaatgaggccctggcgctcctcgac
aaggcgctgcgccaccgccaacccggcccctaccagcttcaggcggccatcgccgccatc
cattcccgcgcgaaacgcgccgaagatacggactgggtggaaatcgatctgctctaccgc
gcgctggaacgtgttcagccgtcgcccgtcgtaacgctcaatcgcgcggtcgttgtttct
aagctgcgcgggccgcaggaggcgctggatctcatcgatccgctcggagagaagctcggg
ggctatttctattatcacggtctgcggggcgggctactgaagcagcttggtctgaccagc
caggcgcgcgaagccttcgaccatgccatcgcgcttgcccattcggcggcggaagccgcc
catatccgccggcagatcgacaagatgcaggaagaggcggcgcagccgattgcaaattaa
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