Rhizobium sp. N1341: AMJ98_PB00102
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Entry
AMJ98_PB00102 CDS
T04420
Name
(GenBank) dipeptide/oligopeptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMJ98_PB00102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhn02000
]
AMJ98_PB00102
Transporters [BR:
rhn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AMJ98_PB00102
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5066
Motif
Other DBs
NCBI-ProteinID:
ANL12163
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All DBs
Position
pRspN1341b:complement(108372..109889)
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AA seq
505 aa
AA seq
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MTIRNMHALRIGLAISLAAGVAMPAYAAEDKLTVVVTDEPKSLDPCDTDLSGNSRILHNN
ITEALVNLSPADGSVVPSLATSWRQVDDLTWEFKLREGVTFHDGKLFDSNAVVAAVKRAQ
DPALACEVGLATLKGVKLNAVVVDPTTVLIKTDVVEPILPNKMSAVDIGSPATPNDGKTR
SPAGTGPYKLGAWTAGQSVTLAAYDGYWGDKPAIKNATIIWRAESAVRAAMVETGEAQIA
YEIAPQDGTSKQDQAFPNAETSLLRIDAQVPPLDDKRVREALNLAIDRDGLVGTIFHEEA
QKAMQVVPPSVFGFNPDIPVWTYDPEKAKSLLAAAKADGVPVDKEIVIYGRIGIYPNSSE
SLEAIQAMLAEAGFNARLEMLETSPWLKRLLKPWDKERQASILQTQIDNAEGDAVFTLPN
RFTTDGNQSTIADAKLDKLIADGSKATGDERKKLFQEAFRYIAVDAVNIAPLFHMVSIAR
VAKDVNYTPDVQAGNEIKLKSISYR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaggaatatgcacgcgttacgcatcgggcttgcgatctccttggcggcgggt
gtcgcaatgccggcctacgccgccgaggacaagctgacggttgtggtgacggacgagccg
aagtcgctggatccctgcgacaccgatctttcgggaaattcccgcatcctgcacaacaat
atcaccgaagcactggtcaacctcagcccggcagacggatcggtcgttccaagccttgcc
accagctggcgacaggtcgacgacctgacctgggagttcaagctgcgcgagggggtgacg
ttccatgacggcaagctgttcgattccaacgcagtcgtcgccgctgtcaagcgtgctcaa
gacccggcactggcctgtgaagtcggactggccactttgaagggcgtcaagctcaatgcg
gtggtcgtcgacccgacgaccgtcctcatcaaaaccgacgtcgtcgagccgatcctgccg
aacaagatgtctgccgtcgacatcggttcgccggcgaccccgaatgacggcaagacgcgc
agcccggctggaaccgggccttacaagctgggagcatggacagcaggccagtcggtgacg
ctggcggcctatgacggatattggggcgataagccggcaatcaagaatgcgacgatcatc
tggcgtgccgaatccgccgttcgtgcggcaatggtggagaccggcgaggcgcagatcgct
tacgaaatcgcgccgcaggatggcacgagtaaacaggatcaggcctttccgaacgctgaa
acgtcgctgctgaggatcgatgcccaggtgccgccgctcgacgacaaacgcgtgcgtgaa
gcgctcaatctcgcgatcgaccgggacggcctcgtcggaaccattttccatgaggaagcc
cagaaggcaatgcaggtcgtgccgccttcggtgttcggcttcaatcccgacattcccgtc
tggacctatgatccggaaaaggcgaagtcgctgcttgctgcggccaaggccgatggcgtg
ccggtcgacaaggagatcgtcatctacggtcgcatcggcatatatcccaactcgtcggaa
agcctggaggccattcaggcgatgctggcggaggctggtttcaacgcgcggcttgaaatg
ctcgagaccagcccatggctgaaacggcttctgaagccgtgggacaaggaacgccaggcg
tccatcctgcagacgcaaatcgacaatgccgagggggatgcggtgttcaccctgcccaac
cgcttcaccaccgacggcaatcagtcgacaatcgcagacgccaagctcgacaagctgatt
gccgatgggtcgaaggcaaccggcgacgagcgcaagaagctgttccaggaggcgttccga
tacatcgccgtcgatgcggtcaatatcgcgccgctcttccatatggtctcgatcgcccgc
gtcgcaaaggacgtgaactacacccccgatgtgcaggccggcaacgagatcaagctgaaa
tcgatcagctatcgctga
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