Fontisubflavum oceani: QTA57_08960
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Entry
QTA57_08960 CDS
T09173
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rhoc
Fontisubflavum oceani
Brite
KEGG Orthology (KO) [BR:
rhoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhoc03009
]
QTA57_08960
Enzymes [BR:
rhoc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
QTA57_08960
Ribosome biogenesis [BR:
rhoc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QTA57_08960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
WJY23175
LinkDB
All DBs
Position
1729487..1730515
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AA seq
342 aa
AA seq
DB search
MPSVQIITVLIGPDPGSRLDKALARDVPEAASLSRSRLSRLIAEGAVRVNGDVVTDGKAR
VAEGAQVEITLTEAAEIETRPEDIPLDIRYEDDDLIVVNKPAGMVVHPAPGTPGGTLVNA
LLHHFGGNLSGVGGEKRPGIVHRIDKDTSGLLVVAKSDRAHHGLADQFAAHSVERLYQAL
CHGVPDPADPRLRGIKGVSFEPGGVLKITTQLARHKTDRQRQAVLFHGGRHAVTRVQVAE
TFGVAARVECRLETGRTHQIRVHMAHVGHGLLGDQTYGGKRRIGAKVVGEDLAAALNGFP
RQALHAASLGFNHPVSGDWMRFEADLPGDMADLLAALRGSAL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtgtccagatcatcacggtcctgatcggcccggacccaggcagtcgccttgat
aaggcactggcccgcgatgtgccagaggcggcaagcctgagccgctcgcggctgtcacgg
ctgatcgccgagggggcggtgcgggtgaatggcgatgtggtgaccgatggcaaggcccgc
gtggccgagggggcgcaggtcgagatcacgctgaccgaggccgccgagatcgagacccgg
cccgaagacatcccgctcgatatccgctatgaagatgacgatctgatcgtggtgaacaaa
ccggctggcatggttgtgcatccggccccgggcaccccgggcggaacgctggtcaacgcg
ctcttgcatcatttcggcggcaatctctctggcgtgggcggcgagaaacgtcccggcatc
gtgcatcggatcgacaaggatacgagcggcttgctggtcgtcgcaaaatcggaccgcgcc
catcacgggctggccgatcaattcgcggcccacagtgtcgagcggctctaccaagcgctc
tgccacggcgtgccagatccggcagacccgcgcctgcgcgggatcaaaggtgtgagcttt
gaaccgggcggggttctgaaaatcacgacgcaattggcgcgtcataagaccgaccggcag
cgtcaggcggtgctgtttcacggcggccgccatgcggtgacccgggtgcaggtggccgag
actttcggcgtggcggcgcgggtggagtgccgcttggaaaccgggcggacgcatcagatc
cgcgtgcatatggcccatgtcggccacgggctgcttggggatcagacctatggcggcaag
cgccggatcggggcgaaggtggtgggagaagacttggccgccgcgctcaatggcttccca
cgccaagcgctgcatgcggccagtttgggctttaatcacccggtcagcggcgactggatg
cggttcgaggcggatttgccgggcgacatggccgatttgcttgcggcgctgcgcggttca
gccctgtaa
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