Rhodococcus sp. 008: AOT96_19875
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Entry
AOT96_19875 CDS
T05462
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhod
Rhodococcus sp. 008
Pathway
rhod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOT96_19875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhod03021
]
AOT96_19875
03400 DNA repair and recombination proteins [BR:
rhod03400
]
AOT96_19875
Enzymes [BR:
rhod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOT96_19875
Transcription machinery [BR:
rhod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOT96_19875
DNA repair and recombination proteins [BR:
rhod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOT96_19875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ANQ72861
LinkDB
All DBs
Position
4281087..4282148
Genome browser
AA seq
353 aa
AA seq
DB search
MLISQRPTLTEEVIADNRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVNSEEDEPVTMYVRKQGPGAVTAGDIVPPAGVTVNN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVGRTESDLLDIRNFGQKSIDEVKVK
LHSLGLSLKDSPASFDPTTVAGYDAATGTWSDTDAGSFGDAEGTEDYAETEQL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgacccacgctgaccgaagaggtcatcgctgataaccgctcgaag
ttcgtcatcgagcccctggagccaggtttcgggtacacgctcggcaattcgctgcgccgc
acgctgctctcgtcgatccccggcgctgctgtcaccagcatccgtatcgacggcgttctc
cacgagttcaccaccgtcccgggcgtgaaggaagatgtcaccgacatcatcctgaacctc
aagggcctcgtcgtgaactccgaagaggacgagccggtcaccatgtacgtccgcaagcag
ggccccggcgctgttactgcgggcgacatcgtgcccccggcaggcgtcaccgtgaacaac
cctgatctgcacatcgccaccctgaacgacaagggaaagctggagatcgagctcgtagtc
gagcgcggtcgtggctatgtccccgccgttcagaacaaggcgtccggcgcagagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtggaggcc
actcgcgtcgaacagcgcaccgacttcgatcggctcgttctcgacgtggaaacgaagaac
tccatcaccgcacgggacgcgctcgcttcggcgggcaagaccctggttgagctcttcggc
ctggcccgtgagctgaacgtcgaagcagaaggaatcgagatcggaccctcgcctgccgag
gccgatcacatcgcttccttcggactccccatcgaggatctggacctcacggtccgctcc
tacaactgcctcaagcgcgaaggtgttcacaccgtcggtgagcttgtcggccgtaccgag
tccgatctgctcgacatccgcaacttcggacagaagtccatcgacgaggtcaaggtcaag
ctgcattcgctcggcctgtccctcaaggacagccccgcatccttcgatcccaccaccgtt
gccggctacgacgccgccaccggaacgtggagtgacactgatgccggttccttcggcgat
gccgaaggtaccgaggactacgccgagaccgaacagctgtag
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