Rhodococcus sp. 008: AOT96_27660
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Entry
AOT96_27660 CDS
T05462
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rhod
Rhodococcus sp. 008
Brite
KEGG Orthology (KO) [BR:
rhod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhod03009
]
AOT96_27660
Enzymes [BR:
rhod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AOT96_27660
Ribosome biogenesis [BR:
rhod03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AOT96_27660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ANQ74183
LinkDB
All DBs
Position
complement(6007375..6008301)
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AA seq
308 aa
AA seq
DB search
MRESRSMPVPDGLDAMRVDAGLARLLGLSRTVVATLAEEGSVLVDGVAVGKSDRLTAGSW
LEVVLPEPPRPLTIEATPVEGMEILYADDDVVAVDKPVGVAAHASVGWTGPTVIGGLAAA
GFRISTSGAHERQGIVHRLDVGTSGVMVVATSERAYTLLKRAFKQRTIDKRYHALVQGHP
DPSSGTIDAPIGRHHGNDWRFTVTADGKPSVTHYDTIEAFQAASLLDVHLETGRTHQIRV
HFSALRHPCCGDLTYGADPRLAERLGLERQWLHAVSLGFAHPADGRWVEIKSKYPKDLEH
ALEVLRSS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgagggaatcccgttcgatgccagtgcccgacggtctcgatgccatgcgcgtcgatgcc
ggcctcgcgcgccttctcggactctcgcgcaccgtggtcgcgacactcgcggaagaaggc
tcggtactcgtcgacggtgtggccgtcggcaagtccgatcgtctgaccgcagggtcgtgg
ctcgaggtagtcctgcccgaaccgccgcggcccctgaccatcgaagcgacaccggtcgag
ggaatggagatcctctacgccgacgacgacgtcgtggcagtcgacaagcccgtcggagtt
gccgcgcacgccagcgtcgggtggacgggaccgaccgtcatcggcggacttgccgcggcc
ggtttccgcatctcgacgtccggtgcccacgagcgtcagggcatcgtccaccgtctggac
gtcggaacgtcgggtgtcatggtggttgccacatccgagcgcgcgtacacgttgctcaag
cgcgctttcaagcagcggaccatcgacaagcgctaccacgctctcgtgcagggacatccc
gacccgagcagcggaacgatcgacgcgcccatcggacgccatcacgggaacgactggcga
ttcacggtcacggccgacggcaagcccagcgtcacgcactacgacaccatcgaggcgttc
caggcagcgagtctgctggacgtgcacctcgaaaccggtcgcacacaccagatccgtgtc
cacttttcggcgttgcgccatccgtgctgcggcgacctgacttacggcgcggaccctcga
cttgccgaaaggctcggcctcgagcgccagtggttgcacgccgtgtctcttggattcgca
catccggcggacggtcgctgggtcgagatcaagagcaagtacccgaaggatctcgaacac
gcactcgaagttctccggtcctcatga
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