Rhodococcus sp. p52: IM25_01820
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Entry
IM25_01820 CDS
T05434
Name
(GenBank) nuclease
Organism
rhq
Rhodococcus sp. p52
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
RNase_H_2
AAA_30
AAA_11
AAA_19
PDDEXK_1
ResIII
AAA_22
Helicase_RecD
Viral_helicase1
SLFN-g3_helicase
UvrD_C_2
AAA
HHH_5
DEAD
Motif
Other DBs
NCBI-ProteinID:
AOD20534
UniProt:
A0A1B2U8R9
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All DBs
Position
408828..412322
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AA seq
1164 aa
AA seq
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MFLLDDRLVFGAGDLTRAASCEFAVLRNLDSTLGRLPRPDTEPDAMLDRVAALGGRHEQR
VLDRFRAQVGAEKVVEIARPEYTAQALTEAAQATLDAVRAGAPVVYQGAFFDTGFSDTAP
DPLGMIGFSDFLVLEDDGYAVYDSKLSRHAKVEALLQLAAYADALARTGTPVSSHAHLVL
GDGSIASYPLAEIMPVYRHRRACLETLLTSHRAAPGPVRWGAGGHTACGRCDDCTPELER
HRDLLLVAGMRSTQRLRLIEAGVSTIDDLAACAAPVDGMARRTFDALRAQARAQLEEERR
DSPYAEVYDATPLGILPAPDEGDIFFDFEGDPLWSEGGSSEWGLEYLFGVVEGPADAPIF
RPFWAHDREQERQALLDFLDYVTDRRRRHPRMHVYHYAPYEKTALLRLAGRYGVGEEIVD
DLLREGVLVDLYPVVRNSIRVGARTYGLKKLEPLYTEESEARDGDVADAGASIVAYADYC
ALRDAGHLEDAERELASIASYNEADCISTLRLRDWLLTHARDHGISPTETTHDEAAPDAQ
AHPVETKLLEYVGGALAGDRTPEQQAAALVAAAMGYHRRERKPFWWGHFDRLATAPDEWA
DARDTLVAATCTLETDWHKATPRRRLLRRRLRLAGEFEPGSTLRAGQDVFLLYDAPGPDG
LPDGGTGTRAWSRGVVVERTTGTDHPDVLVVDESLRTDEEYSVLPVAVTPGAPISSKNIE
AAIASAAEAMCSELPALPSTAAVDVLRRIPPRLRSGAALPPLGDDAAGTIVTTVLNLENS
YLAVQGPPGTGKTYTGARVVAALVNEHGRRVGVVAQSHSVVENMLAGIVAAGVSPERVAK
AKCQSPDPTWTAFPDAKSLAAHIGTSATGYVVGGTAWDFTNPNYIEPGSLDLLVVDEAGQ
FCLANTIAVATAASNLLLLGDPRQLPQVSQGTHPEPVDESALGWLAEGHGALPTDRGYFL
PVTWRMHPDLCARVSELSYEGRLQSKSEITTRRALDGVPPGVRLVEVAHEGNATCSPEES
AEIVRAIAAVLGSAWTDDAGSPPRPLGEEDVLVVAPYNAQVPRLRQDLAAAGLHRVQVGT
VDKFQGRQAAMVFVSMTASAVEDVPRGMSFLLSRNRSNVALSRGKWSAVIVRSGALTDHL
PSTPDGLIELGAFMRLTGADPTGA
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttctcgacgacaggctggtcttcggcgccggagatctcacccgcgccgcctcg
tgcgagttcgcagtgctccgcaacctcgactcgacgctcggtcggctcccgcgccccgac
accgaacccgacgcaatgctcgaccgtgtcgccgcactcggcggccgccacgagcagcgc
gtcctcgaccgcttccgcgcgcaggtgggtgcggagaaggtcgtcgagatcgcccggccc
gagtacaccgcgcaggcgctcaccgaggcggcgcaggccaccctcgacgccgtccgggcc
ggcgcgcccgtcgtctatcagggcgcgttcttcgacaccggcttctccgacactgccccc
gatccgctcggcatgatcggcttctccgacttcctcgtcctcgaggacgacggctacgcc
gtctacgacagcaaactctcccggcacgcgaaggtcgaggccctgctccagctcgccgct
tacgcggacgcactcgcgcgcaccgggacgccggtgtcctcgcacgcgcatctcgtcctc
ggcgacggctcgatcgcctcctacccgctcgcggagatcatgccggtctatcggcaccga
cgcgcctgcctcgaaacccttctcacgtcgcaccgcgctgcccccgggccggtgcggtgg
ggagcgggtgggcacaccgcctgcggtcgctgcgacgactgcactccggaactcgaacgt
caccgcgacctgctgctggtcgcggggatgcgcagtacccagcggctgcggctgatcgag
gcgggcgtgtcgaccatcgacgacctcgccgcatgcgcggcacccgtcgacgggatggcg
cgccgcaccttcgacgccctgcgcgcccaggcacgggcgcagctcgaggaggagaggcgg
gacagtccctatgcggaggtctacgacgccaccccgctcggcatcctgcccgcgcccgac
gagggcgacatcttcttcgacttcgaaggcgacccactgtggtccgagggtggcagttcc
gagtggggactcgagtacctgttcggcgtcgtggagggaccggccgacgcaccgatcttc
cggcccttctgggcacacgaccgcgagcaggagcggcaggcactgctggacttcctcgac
tacgtcaccgaccgccggcgtcgccacccgaggatgcacgtctaccactacgccccgtac
gagaagacggcgttgctgcggctggcggggcgctacggcgtcggcgaggagatcgtcgac
gacctgctgcgcgaaggtgtgctcgtcgacctgtaccccgtggtgcgcaactcgatccgg
gtgggtgcccggacgtacggactgaagaaactcgaaccgctctacaccgaggagagcgag
gcacgcgacggcgatgtcgccgacgcgggcgcctcgatcgtcgcgtacgccgactactgc
gcactgcgcgacgccgggcacctcgaggatgcggaacgcgaactcgcgtcgatcgcctcc
tacaacgaggccgactgcatctccaccctgcgtctgcgcgactggctgctcacccacgcc
cgcgaccacggcatctcccccaccgagacgacccacgacgaggccgctcccgacgcgcag
gcacaccccgtcgagacgaaactcctcgaatacgtcggcggtgcactggcgggggaccgc
accccggaacagcaggcggccgcactcgtcgccgcggccatgggctaccaccggcgcgag
cggaaacctttctggtggggacacttcgatcgtctggcgacggctcccgacgagtgggcg
gacgcccgcgacacgctggtcgcggcgacgtgcacactcgagaccgactggcacaaggcc
acgccccgccggcgactgctccggcgtcggctgcgcctcgcgggcgagttcgagccgggc
agcacattgcgcgccgggcaggacgtcttcctgttgtacgacgctccgggaccggacgga
ctgcccgacggcggcaccgggacgcgcgcgtggtcgcgcggcgtggtcgtcgaacgcacc
acggggacggaccatcccgacgtgctcgtcgtggacgagtcgctacggacggacgaggag
tactccgtgctaccggtggccgtcactcccggcgcgccgatctcgtcgaagaacatcgaa
gcggcgatcgcctccgccgccgaggcgatgtgcagcgagttgccggctctgccgtcgacc
gcggcggtggacgtactgcgccgcatccctccccgcctgcgctccggtgccgcgctgccg
ccgctcggcgacgacgcggccggcacgatcgtcacgaccgttctcaacctggagaattcg
tacctggcggtgcagggcccacccggcaccggcaagacgtacaccggggcccgggtggtg
gcggcgctcgtgaacgagcacggccggcgcgtcggcgtggtcgcgcagtcgcattcggtg
gtcgagaacatgctggccgggatcgtcgccgcgggagtgtcgccggaacgggtcgccaag
gcgaaatgccagagccccgatccgacgtggaccgccttccctgacgcgaagtcccttgcg
gcgcatatcggtacatccgccaccggctatgtggtgggcggaacggcctgggacttcacg
aatccgaactacatcgagcccggcagcctcgacctgctggtggtcgacgaggccggtcag
ttctgtctcgccaacaccatcgccgtggccacggcggcgtcgaatctgctgctgctcggc
gatccccgccaactgccgcaggtctcgcagggcacccaccccgagccggtcgacgagtcc
gccctcggatggctcgccgaagggcacggtgcgttgcccaccgatcgcggctacttcctt
ccggtgacctggcggatgcacccggatctgtgcgcgcgggtgtccgagttgtcctacgag
ggacgactgcagtcgaagtccgagatcaccacgcgccgcgcgctcgacggcgtcccgccc
ggcgtccggctcgtggaggtcgcgcacgagggcaatgcgacctgctcgcccgaggagagc
gccgagatcgtgcgcgccatcgcagccgtgctcggctcggcgtggacggacgacgccggc
tccccgccgcgacctctcggcgaggaggacgtcctggtggtcgcaccgtacaacgctcag
gtcccccgcctacggcaggatctcgccgccgcgggtctgcaccgggtccaggtgggcacc
gtcgacaagttccagggccgccaggcggcgatggtgttcgtgtcgatgacggcctccgcc
gtcgaggacgtgccgcggggcatgtcgttcctgttgtcccgcaaccggtcgaacgtggct
ctctcacgcggcaagtggtcggcggtgatcgtccggtccggcgccctgaccgatcacctc
ccgtcgacaccggacggcctgatcgaactcggggcgttcatgcggctgaccggagccgac
ccgaccggggcgtga
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