Rhizobium sp. NT-26: NT26_2144
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Entry
NT26_2144 CDS
T04765
Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rht
Rhizobium sp. NT-26
Pathway
rht00473
D-Alanine metabolism
rht00550
Peptidoglycan biosynthesis
rht01100
Metabolic pathways
rht01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00473 D-Alanine metabolism
NT26_2144 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NT26_2144 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NT26_2144 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rht01011
]
NT26_2144 (ddl)
Enzymes [BR:
rht01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NT26_2144 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rht01011
]
Precursor biosynthesis
Amino acid ligase
NT26_2144 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
GARS_A
NAD_binding_8
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
CCF19868
UniProt:
L0NFJ3
LinkDB
All DBs
Position
complement(2084095..2085021)
Genome map
AA seq
308 aa
AA seq
DB search
MSDKHVAVLMGGFSSERPVSLSSGAACAQALEAEGYRVTRVDVDRNVSGVLSDLRPDVAF
NALHGPFGEDGTIQGVLEYLQIPYTHSGVLASALAMDKGQAKHVAKAAGIPVAEARVMSR
FDIGNRHPIEPPYVVKPVREGSSFGVVIVKADQSHPPQVLSSDEWRYGNEVMVERYVHGR
ELTCGVMGDTALGVTEVVPTGNAFYDYDAKYAAGGSTHILPAQISSNVYQKIQSLALKAH
QAMGCRGVSRSDFRYDDRVSEDGEVIWLEVNTQPGMTPTSLVPEMAGHAGLSFGDLVRWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagcatgtggctgttctgatgggagggttttcctccgaacggcccgtgagc
ctgtcttccggggcggcttgcgcccaagccctcgaagccgaaggctaccgtgtcacgcgc
gtcgatgttgatcgcaacgtctccggtgttctttccgatcttcgtccggacgtcgctttc
aatgccctccacggtcctttcggcgaggacggcacgatccaaggcgtcctggagtatttg
cagatcccctacacgcactccggtgtcctcgcgtcggcgctcgccatggataaggggcag
gcgaagcatgttgccaaggccgcgggtatcccggtcgccgaggcgcgggtgatgagtcgc
ttcgatatcggtaatcgccacccaatcgagccgccctatgtcgtgaagcctgtacgcgaa
ggttcgtccttcggcgtggtcatcgtcaaggcggaccaatcccatccgccgcaagttctg
tcgtcggatgagtggcgctacggcaacgaggtgatggtcgagcgctatgtccatggtcgc
gagctgacctgcggcgtcatgggcgatacggcgctcggcgtcaccgaggttgtgccgacg
gggaacgccttctacgattatgatgcgaaatacgcagcgggcggttcgacgcatattctt
cctgcgcagatttcatcgaatgtttaccaaaagatccaatccttggccctcaaggcgcat
caggcgatgggctgccgcggcgtgagtcgatccgatttccgctacgacgaccgcgtttcc
gaagacggcgaggtgatctggctggaggtcaatacccagcccggcatgaccccgacttcg
ctggtgcccgaaatggccgggcatgccggcctctcgttcggtgatctcgtccgttggatg
gtggaggacgcatcgtgtctgcgttga
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