Rhodococcus sp. PBTS 1: A3Q40_01368
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Entry
A3Q40_01368 CDS
T05182
Symbol
ydiO
Name
(GenBank) putative BsuMI modification methylase subunit YdiO
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rhu
Rhodococcus sp. PBTS 1
Pathway
rhu00270
Cysteine and methionine metabolism
rhu01100
Metabolic pathways
Module
rhu_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
rhu00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
A3Q40_01368 (ydiO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhu03000
]
A3Q40_01368 (ydiO)
03032 DNA replication proteins [BR:
rhu03032
]
A3Q40_01368 (ydiO)
03036 Chromosome and associated proteins [BR:
rhu03036
]
A3Q40_01368 (ydiO)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rhu02048
]
A3Q40_01368 (ydiO)
Enzymes [BR:
rhu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
A3Q40_01368 (ydiO)
Transcription factors [BR:
rhu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
A3Q40_01368 (ydiO)
DNA replication proteins [BR:
rhu03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
A3Q40_01368 (ydiO)
Chromosome and associated proteins [BR:
rhu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
A3Q40_01368 (ydiO)
Prokaryotic defense system [BR:
rhu02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
A3Q40_01368 (ydiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AMY18758
UniProt:
A0A143Q7U8
LinkDB
All DBs
Position
complement(1484558..1485880)
Genome browser
AA seq
440 aa
AA seq
DB search
MAQNGIAPTGRYVPGRRHTFLDLFSGSGGMSCGFHRHGGFEVVGAVDAQLGKPSSTRGSL
ECNSSYAANIGRNPHAVDLGTISTRELSDLVAPALAGRPLDVLSACPPCTGFSRANPSNH
ARDDPRNSLVARVADVACEFRPAVVVMENARELVGGNFRGHLEALRQRLEDDGYTVDASV
YMLSELGLPQKRERSVVVAVRGDRPLMTLTDLWSGWRVRPEAVTVRRAIADLPPVEAGVA
HVDDPLHVSPSIGRDSTRRRLRAIPHDGGSWLDLRSAPGGEEHLTPAMRRSIAAGRLGSH
PDVYGRLWWDRPAPTVKRECGHFGNGRYTHPEQDRLCTVRELALLNGFPADYRFDARSLS
NMYRHIGDAVPPLISAQLAAITAWILGDDHTHMPTPHDAVLAGTSLRAEDIEAESHSPGH
PDPTGASPVRVPLDLEHHQR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaacggaattgcgccgaccggtcgttacgttccgggccgacgacacactttt
ctggatctgttcagcggatcgggcgggatgagttgcggtttccaccggcacggcggcttc
gaggtggtcggggccgtggacgcgcagctgggaaaaccgtccagcacccgggggtcgctc
gaatgcaattcgtcctacgccgcgaatatcggacggaacccgcacgcggtggacctcggc
accatttccactcgggagctgtcggacctcgtcgcacccgcccttgccgggcgacctctc
gacgtcctcagcgcctgcccaccgtgcaccggcttctcgcgtgcgaatccgtcgaatcat
gcccgagacgatccccgcaattcgttggtcgcccgcgtcgcggacgtggcctgcgagttc
cgccccgcagtcgtcgtgatggagaacgcgcgcgaattggtcggcgggaatttccgaggc
catctcgaggccctgcggcaacgcctcgaggacgacggatacaccgtcgacgcgtcggtg
tacatgctctccgagctcgggctgccgcagaagcgggagcgatccgtcgtcgtcgcggtg
cgcggcgatcggcccctgatgacgctcacggacctgtggagcgggtggcgcgtccggccg
gaggcggtgaccgtgcgacgcgccatcgccgacctgcccccggtcgaggccggcgtcgcc
cacgtcgacgatcccctgcacgtctcgccgagcatcggccgggactccacccgtcgacgc
ctgcgcgccatcccgcacgacggcggatcctggctcgatctccggtcggcgccgggcggc
gaggagcacctgacgccggcgatgcgacgctcgatcgcggcgggccgcctcggatcgcat
cccgacgtctacgggcgcctgtggtgggaccgcccggcgcccaccgtcaaacgcgagtgc
ggccacttcggcaacgggcggtacacccaccccgagcaggaccggctctgcaccgtacga
gagctggctctgctcaacggctttcccgcagattaccggttcgatgcccgctccctgtcc
aacatgtaccgccacatcggcgacgccgtcccaccgttgatctccgcccaactggccgcg
atcacagcctggatcctcggcgacgaccacacgcacatgccgacgccccacgacgccgtg
ctcgcgggcacctcgctgcgggcggaggacatcgaggccgagtcgcactcacccggacac
ccggacccaaccggagcgtccccggtgcgcgtacccctcgacctcgagcaccaccagcgc
tga
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