Rhizobium sp. S41: BA939_22835
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Entry
BA939_22835 CDS
T05451
Name
(GenBank) RNA polymerase subunit sigma
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rhv
Rhizobium sp. S41
Brite
KEGG Orthology (KO) [BR:
rhv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhv03021
]
BA939_22835
Transcription machinery [BR:
rhv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BA939_22835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
DUF1804
Phage_antitermQ
HTH_20
HTH_Tnp_1
HTH_38
HU-CCDC81_euk_2
UBA_2
Phage_CI_repr
Motif
Other DBs
NCBI-ProteinID:
ANV27593
LinkDB
All DBs
Position
2:complement(1738781..1739323)
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AA seq
180 aa
AA seq
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MQGTEIASLIHRVGMGDRSAFVSLYQATSPKLFAICLKILRDRTDAEEALQEIYIKVWQR
ARTFAASAGKPATWLATIARNHAIDTIRARRPAGNDIDEAYDLVDESVRDPEQHVVLADE
GRRIDDCMRELETVHAQAIRRAYVEGLSYLELADELRVPLNTVRTWLRRSLLKLRECMQR
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcacagagatcgcaagccttatccaccgcgtcggcatgggtgatcgttcagca
ttcgtctcgctttaccaggcaacaagcccgaagctttttgcgatctgcctgaaaatcctg
cgggacagaacggacgccgaggaggcgctgcaggaaatttatatcaaggtgtggcagcgc
gcccgcacatttgccgctagtgccggcaaaccggcgacatggctcgccaccatcgcgcgc
aaccacgccatagatacgattcgcgcccgcagacctgctggcaatgacattgacgaggca
tatgacctcgtcgacgaaagcgttcgcgatcctgaacagcatgttgttctggcggatgaa
ggccgcaggatcgacgactgcatgcgggaacttgaaactgtgcacgcacaggcaatacgc
cgggcctatgtcgagggtctgagctatctcgaactcgccgacgaattacgcgtgccactg
aatacggttagaacctggctgcggcgcagtcttctcaaactcagagagtgcatgcagcga
tga
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